RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SMYD2Q9NRG4 433 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■■■□□ 14.8
SDC1-202ENST00000381150 ADA2Q9NZK5 511 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ASS1P00966 412 aaKnown RBP14.23□□□□□ -0.13
SDC1-202ENST00000381150 SOX11P35716 441 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 SLC18A2Q05940 514 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 TRIM72Q6ZMU5 477 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 EEPD1Q7L9B9 569 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 C10orf107Q8IVU9 208 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 FBXW8Q8N3Y1 598 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 BHLHE22Q8NFJ8 381 aaPredicted RBP14.23□□□□□ -0.13
SDC1-202ENST00000381150 GPR20Q99678 358 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ACO2Q99798 780 aaKnown RBP14.23□□□□□ -0.13
SDC1-202ENST00000381150 TRPV6Q9H1D0 765 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 RRN3Q9NYV6 651 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ANK1P16157 1881 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 SDR42E2A6NKP2 422 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ADCY6O43306 1168 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 TBXAS1P24557 533 aaPredicted RBP14.23□□□□□ -0.13
SDC1-202ENST00000381150 GRIA1P42261 906 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 TFAMQ00059 246 aaKnown RBP14.23□□□□□ -0.13
SDC1-202ENST00000381150 GRM1Q13255 1194 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 MPP5Q8N3R9 675 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ATP2A3Q93084 1043 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ZNF512Q96ME7 567 aaPredicted RBP14.23□□□□□ -0.13
SDC1-202ENST00000381150 ARMC7Q9H6L4 198 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 TXNRD2Q9NNW7 524 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 PCDHGA4Q9Y5G9 962 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 TCRBV5S1A1TA0A578 114 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 CCDC78A2IDD5 438 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 ADM5C9JUS6 153 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 COQ9O75208 318 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 CALB1P05937 261 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 MMP8P22894 467 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 KDELR1P24390 212 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 PIGHQ14442 188 aaPredicted RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 Q3C1V9 767 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 SH3PXD2AQ5TCZ1 1133 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 IER5Q5VY09 327 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 FAM160B1Q5W0V3 765 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 CDR2LQ86X02 465 aaPredicted RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 SNX32Q86XE0 403 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 PGLYRP2Q96PD5 576 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 LENG8Q96PV6 779 aaPredicted RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 CCDC28BQ9BUN5 200 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 OXCT2Q9BYC2 517 aaPredicted RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 CEP41Q9BYV8 373 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 DDX56Q9NY93 547 aaKnown RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 CNTN3Q9P232 1028 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 DMTF1Q9Y222 760 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 SH3GLB1Q9Y371 365 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 RFPL1O75677 317 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 DDNO94850 711 aaPredicted RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 FAM163BP0C2L3 166 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 RBL1P28749 1068 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 MYBPC1Q00872 1141 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 LAMTOR4Q0VGL1 99 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 TRPC3Q13507 836 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 ART3Q13508 389 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 KYAT3Q6YP21 454 aaKnown RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 CLVS1Q8IUQ0 354 aaPredicted RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 WDR49Q8IV35 697 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 MYO1HQ8N1T3 1032 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 TFB1MQ8WVM0 346 aaKnown RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 JADE3Q92613 823 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 KCNK16Q96T55 309 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 UNKQ9C0B0 810 aaKnown RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 PTPRHQ9HD43 1115 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 NGRNQ9NPE2 291 aaKnown RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 CPSF3Q9UKF6 684 aaKnown RBP14.22□□□□□ -0.13
SDC1-202ENST00000381150 SSX2IPQ9Y2D8 614 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 PPME1Q9Y570 386 aa14.22□□□□□ -0.13
SDC1-202ENST00000381150 DNAJC25-GNG10A0A024R161 153 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 LRCH4O75427 683 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 PSMC3P17980 439 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 PROZP22891 400 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 EFNA5P52803 228 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 ANKDD1AQ495B1 522 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 TRIM50Q86XT4 487 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 LRRC43Q8N309 656 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 C20orf96Q9NUD7 363 aaPredicted RBP14.21□□□□□ -0.13
SDC1-202ENST00000381150 RBPJLQ9UBG7 517 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 MCM3APO60318 1980 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 PGK2P07205 417 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 COX4I1P13073 169 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 XRCC1P18887 633 aaPredicted RBP14.21□□□□□ -0.13
SDC1-202ENST00000381150 TYK2P29597 1187 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 RAP1GAPP47736 663 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 GTF2A2P52657 109 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 YWHAZP63104 245 aaKnown RBP14.21□□□□□ -0.13
SDC1-202ENST00000381150 CDKL1Q00532 357 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.13
SDC1-202ENST00000381150 RAB6CQ53S08 254 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 GADL1Q6ZQY3 521 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 TSPAN14Q8NG11 270 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 DIS3LQ8TF46 1054 aaKnown RBP14.21□□□□□ -0.13
SDC1-202ENST00000381150 NLRP7Q8WX94 980 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 DHRS4Q9BTZ2 278 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms