RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KIAA1522Q9P206 1035 aaPredicted RBP24.03■■□□□ 1.44
U2AF1-202ENST00000380276 GPSM3Q9Y4H4 160 aa24.03■■□□□ 1.44
U2AF1-202ENST00000380276 PCDHB4Q9Y5E5 795 aa24.03■■□□□ 1.44
U2AF1-202ENST00000380276 TYW5A2RUC4 315 aaKnown RBP24.02■■□□□ 1.44
U2AF1-202ENST00000380276 M0QYV0 167 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 GRIA4P48058 902 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 CCT8P50990 548 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 TBX4P57082 545 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 FKBP3Q00688 224 aaKnown RBP24.02■■□□□ 1.44
U2AF1-202ENST00000380276 ACAP1Q15027 740 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 COL28A1Q2UY09 1125 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 NUGGCQ68CJ6 796 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 ANKRD40Q6AI12 368 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 MARCH9Q86YJ5 346 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 CCDC117Q8IWD4 279 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-202ENST00000380276 UNC45BQ8IWX7 931 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 ENGASEQ8NFI3 743 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 BAHD1Q8TBE0 780 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-202ENST00000380276 SGK2Q9HBY8 427 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 ARMCX3Q9UH62 379 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-202ENST00000380276 KIAA1257Q9ULG3 409 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 COQ4Q9Y3A0 265 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 TMEM131Q92545 1883 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 PLXNB3Q9ULL4 1909 aa24.02■■□□□ 1.44
U2AF1-202ENST00000380276 ACSL4O60488 711 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 CD27P26842 260 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 C21orf59P57076 290 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 MCCD1P59942 119 aaPredicted RBP24.01■■□□□ 1.43
U2AF1-202ENST00000380276 PIK3R6Q5UE93 754 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 MSANTD2Q6P1R3 559 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 TMPRSS7Q7RTY8 843 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 CARNMT1Q8N4J0 409 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 HNRNPLLQ8WVV9 542 aaKnown RBP24.01■■□□□ 1.43
U2AF1-202ENST00000380276 MIS12Q9H081 205 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 TOR4AQ9NXH8 423 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 RAXQ9Y2V3 346 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 NUMA1Q14980 2115 aa24.01■■□□□ 1.43
U2AF1-202ENST00000380276 ADAMTS20P59510 1910 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 PTPRBP23467 1997 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 PKD1L2Q7Z442 2459 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 TRIM49BA6NDI0 452 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 H0Y8X5 98 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 RNASEH1O60930 286 aaKnown RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 LTFP02788 710 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 BRD2P25440 801 aaKnown RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 SLC6A4P31645 630 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 GRK6P43250 576 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 ZNF658Q5TYW1 1059 aaPredicted RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 PMF1Q6P1K2 205 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 LCLAT1Q6UWP7 414 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 KIAA0907Q7Z7F0 614 aaPredicted RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 DHX40Q8IX18 779 aaKnown RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 PPM1KQ8N3J5 372 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 ZNF557Q8N988 423 aaPredicted RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 HJURPQ8NCD3 748 aaPredicted RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 CLEC4CQ8WTT0 213 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 IRGQQ8WZA9 623 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 TFAP2BQ92481 460 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 IGSF8Q969P0 613 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 NT5C1BQ96P26 610 aa24■■□□□ 1.43
U2AF1-202ENST00000380276 DDX50Q9BQ39 737 aaKnown RBP24■■□□□ 1.43
U2AF1-202ENST00000380276 IRAK2O43187 625 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 PMS1P54277 932 aaKnown RBP23.99■■□□□ 1.43
U2AF1-202ENST00000380276 INAVAQ3KP66 663 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 FAM133BQ5BKY9 247 aaKnown RBP23.99■■□□□ 1.43
U2AF1-202ENST00000380276 MPP7Q5T2T1 576 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 KIAA0895LQ68EN5 471 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 DBX2Q6ZNG2 339 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 PDZD3Q86UT5 571 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 SCML4Q8N228 414 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 GALNT15Q8N3T1 639 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 OSGEPQ9NPF4 335 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 FBXL12Q9NXK8 326 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 CEP83Q9Y592 693 aa23.99■■□□□ 1.43
U2AF1-202ENST00000380276 FAM149AA5PLN7 773 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 TNFSF14O43557 240 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 SIN3BO75182 1162 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 MOCS2O96007 188 aaPredicted RBP23.98■■□□□ 1.43
U2AF1-202ENST00000380276 CALCAP01258 141 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 PAEPP09466 180 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 CSKP41240 450 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 CDH18Q13634 790 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 CCDC40Q4G0X9 1142 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 PKDCCQ504Y2 493 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 UBR7Q8N806 425 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 ERCC4Q92889 916 aaPredicted RBP23.98■■□□□ 1.43
U2AF1-202ENST00000380276 SLC35C1Q96A29 364 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 PRICKLE1Q96MT3 831 aaPredicted RBP23.98■■□□□ 1.43
U2AF1-202ENST00000380276 ACE2Q9BYF1 805 aaPredicted RBP23.98■■□□□ 1.43
U2AF1-202ENST00000380276 PABPC3Q9H361 631 aaKnown RBP23.98■■□□□ 1.43
U2AF1-202ENST00000380276 FTSJ1Q9UET6 329 aa23.98■■□□□ 1.43
U2AF1-202ENST00000380276 A0A1W2PP55 124 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 SMC2O95347 1197 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 IGLV3-27P01718 113 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 ASLP04424 464 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 FMO5P49326 533 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 SFSWAPQ12872 951 aaKnown RBP23.97■■□□□ 1.43
U2AF1-202ENST00000380276 KCNT1Q5JUK3 1230 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 NADSYN1Q6IA69 706 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 SLC35F5Q8WV83 523 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms