RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SRGAP2BP0DMP2 458 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 CREB1P16220 341 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 CCR1P32246 355 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 PRSS55Q6UWB4 352 aaPredicted RBP20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 DENND5BQ6ZUT9 1274 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 ANKS3Q6ZW76 656 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 RIBC1Q8N443 379 aaPredicted RBP20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 COLGALT1Q8NBJ5 622 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 MCUQ8NE86 351 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 SPPL2BQ8TCT7 592 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 HAPLN3Q96S86 360 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 TMEM39AQ9NV64 488 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 SEPT10Q9P0V9 454 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 DOCK4Q8N1I0 1966 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 STK10O94804 968 aaKnown RBP20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 CHN1P15882 459 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 TPSB2P20231 275 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 WASHC5Q12768 1159 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 SEMA5AQ13591 1074 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 TPSAB1Q15661 275 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 MGAT5BQ3V5L5 792 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 CNKSR3Q6P9H4 555 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 TDRPQ86YL5 185 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 BCAS4Q8TDM0 211 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 FBF1Q8TES7 1133 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 MAML1Q92585 1016 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 SEPT5Q99719 369 aaPredicted RBP20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 CEP41Q9BYV8 373 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 GMIPQ9P107 970 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 KIAA0100Q14667 2235 aaKnown RBP20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 NCAM2O15394 837 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 OPHN1O60890 802 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 ATP2A2P16615 1042 aaKnown RBP20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 YWHAQP27348 245 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 FDFT1P37268 417 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 PPP2R5DQ14738 602 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 ARHGAP18Q8N392 663 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 ZNF333Q96JL9 665 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 EPN3Q9H201 632 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 CWH43Q9H720 699 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 PPANQ9NQ55 473 aaKnown RBP20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 CDY1Q9Y6F8 540 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 FAM92AA1XBS5 289 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 F5H423 210 aaPredicted RBP20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 TSHRP16473 764 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 SEC24CP53992 1094 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 SMARCB1Q12824 385 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 DUSP4Q13115 394 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 TMED2Q15363 201 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 RWDD4Q6NW29 188 aaKnown RBP20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 ZNF534Q76KX8 674 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 TADA2BQ86TJ2 420 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 ZNF567Q8N184 647 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 MRRFQ96E11 262 aaKnown RBP20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 SERPINB11Q96P15 392 aa20.43■□□□□ 0.86
PDLIM5-205ENST00000380180 LTBP2Q14767 1821 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 KCNU1A8MYU2 1149 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 KCNK1O00180 336 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 HAPLN1P10915 354 aaPredicted RBP20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 SERPINB6P35237 376 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 GEMIN4P57678 1058 aaKnown RBP20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 PPIDQ08752 370 aaKnown RBP20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 FBXO32Q969P5 355 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 CENPTQ96BT3 561 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 ACSS3Q9H6R3 686 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 SLC24A2Q9UI40 661 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 NEU3Q9UQ49 428 aa20.42■□□□□ 0.86
PDLIM5-205ENST00000380180 PIAS1O75925 651 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 RTN3O95197 1032 aaPredicted RBP20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 EFEMP2O95967 443 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 GRIA1P42261 906 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 EFTUD2Q15029 972 aaKnown RBP eCLIP20.41■□□□□ 0.865e-8■□□□□ 11.1
PDLIM5-205ENST00000380180 MSANTD2Q6P1R3 559 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 SRRM1Q8IYB3 904 aaKnown RBP20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 FBXO22Q8NEZ5 403 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 SPATA17Q96L03 361 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 FCRL2Q96LA5 508 aaPredicted RBP20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 XPO6Q96QU8 1125 aaKnown RBP20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 OXCT2Q9BYC2 517 aaPredicted RBP20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 PPCSQ9HAB8 311 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 COL4A6Q14031 1691 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 ADAM12O43184 909 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 CLTBP09497 229 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 MX2P20592 715 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 MAGEA3P43357 314 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 GALNT2Q10471 571 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 PARP6Q2NL67 630 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 PID1Q7Z2X4 250 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 DEPDC1BQ8WUY9 529 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 HDAC11Q96DB2 347 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 VN1R3Q9BXE9 311 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 BRD8Q9H0E9 1235 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 FETUBQ9UGM5 382 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 TLR6Q9Y2C9 796 aa20.41■□□□□ 0.86
PDLIM5-205ENST00000380180 SRRM3A6NNA2 597 aaPredicted RBP20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 RASA4BC9J798 803 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 RASA4O43374 803 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 MOCS2O96007 188 aaPredicted RBP20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 PTPN3P26045 913 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 GARSP41250 739 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms