RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 NELFEP18615 380 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 TUBP50607 506 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 LBRQ14739 615 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 NUP93Q8N1F7 819 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 MPP5Q8N3R9 675 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 JADE3Q92613 823 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 CAB39LQ9H9S4 337 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 BTBD7Q9P203 1132 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 ARHGAP28Q9P2N2 729 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 TYROBPO43914 113 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 TBC1D12O60347 775 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 TPST1O60507 370 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 ABCE1P61221 599 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 KRT72Q14CN4 511 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 ITPRIPL1Q6GPH6 555 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 MAGEB2O15479 319 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 ZBTB48P10074 688 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PSMB4P28070 264 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 ACAP1Q15027 740 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 RBM44Q6ZP01 1051 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PTAR1Q7Z6K3 402 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PPP1R13LQ8WUF5 828 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 LGMNQ99538 433 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 MIPEPQ99797 713 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SMARCAD1Q9H4L7 1026 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 RPL26L1Q9UNX3 145 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 RNF103O00237 685 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SRP72O76094 671 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PAMP19021 973 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 UBA1P22314 1058 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 CNTFP26441 200 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 AQP4P55087 323 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PLEKHH3Q7Z736 793 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 CMC1Q7Z7K0 106 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SPATA6LQ8N4H0 392 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 ADAM32Q8TC27 787 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SLC7A6OSQ96CW6 309 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SYBUQ9NX95 663 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 IPO11Q9UI26 975 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 BARX2Q9UMQ3 279 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 C19orf81C9J6K1 198 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 KCNA2P16389 499 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PEX2P28328 305 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 ARMC3Q5W041 872 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 KYQ8NBH2 561 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 TUBGCP5Q96RT8 1024 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 TRIM15Q9C019 465 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 LRRC42Q9Y546 428 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 KCNK1O00180 336 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PSMC3P17980 439 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 ACO1P21399 889 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 GRK2P25098 689 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 WNT7BP56706 349 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 NOMO1Q15155 1222 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 CTU1Q7Z7A3 348 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 UNC5BQ8IZJ1 945 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 TMEM130Q8N3G9 435 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PANX3Q96QZ0 392 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PRPF18Q99633 342 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 SSU72Q9NP77 194 aaKnown RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 PRMT7Q9NVM4 692 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-202ENST00000379826 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 AK5Q9Y6K8 562 aa11.67□□□□□ -0.54
SMAD9-202ENST00000379826 GNGT2O14610 69 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 ITM2AO43736 263 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 STILQ15468 1287 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 CYP2R1Q6VVX0 501 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 KYAT3Q6YP21 454 aaKnown RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 IFNEQ86WN2 208 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 PPHLN1Q8NEY8 458 aaKnown RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 VANGL2Q9ULK5 521 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 MYH14Q7Z406 1995 aaKnown RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 A0A096LPK6 155 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 XPOTO43592 962 aaKnown RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 TGDSO95455 350 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 CSH1P0DML2 217 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 CSH2P0DML3 217 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 TMEM132BQ14DG7 1078 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 TRMT10BQ6PF06 316 aaKnown RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 OR52K1Q8NGK4 314 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 PBXIP1Q96AQ6 731 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 NR1H4Q96RI1 486 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 B3GNT5Q9BYG0 378 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 HMGXB4Q9UGU5 601 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 PPM1HQ9ULR3 514 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 FARP2O94887 1054 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 FAM58BPP0C7Q3 252 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 ZNF286BP0CG31 522 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 SLC6A3Q01959 620 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms