RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 HTR7P34969 479 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 SERPINB6P35237 376 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 CXCR3P49682 368 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 LIG3P49916 1009 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 SERPINB9P50453 376 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 AFF1P51825 1210 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 TPI1P60174 286 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 NME3Q13232 169 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 NAB1Q13506 487 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 EFTUD2Q15029 972 aaKnown RBP eCLIP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 PARP6Q2NL67 630 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 KBTBD12Q3ZCT8 623 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 TTC39BQ5VTQ0 682 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 C4orf50Q6ZRC1 276 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 HFE2Q6ZVN8 426 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 SPATA21Q7Z572 469 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 ZNF598Q86UK7 904 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 IGDCC3Q8IVU1 814 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 C4orf33Q8N1A6 199 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 GSDMBQ8TAX9 411 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 RSPH1Q8WYR4 309 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 NDRG1Q92597 394 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 MTBPQ96DY7 904 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 CFAP36Q96G28 342 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 SIGLEC10Q96LC7 697 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 PKMYT1Q99640 499 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 EPAS1Q99814 870 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 EBNA1BP2Q99848 306 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 RTP3Q9BQQ7 232 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 TSEN34Q9BSV6 310 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 NAT9Q9BTE0 207 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 OSBPL7Q9BZF2 842 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 RGS18Q9NS28 235 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 IGSF9Q9P2J2 1179 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 PCDHB8Q9UN66 801 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 STARD13Q9Y3M8 1113 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 TIMM13Q9Y5L4 95 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 A0A1W2PPM1 405 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 ANKRD65E5RJM6 399 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 TMEM189-UBE2V1I3L0A0 370 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 CREB3O43889 395 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 MAP3K6O95382 1288 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 POMCP01189 267 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 USP17L7P0C7H9 530 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 NCAM1P13591 858 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 MX2P20592 715 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 CNTFP26441 200 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 ACLYP53396 1101 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 PITX1P78337 314 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 SLC18A2Q05940 514 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 FAXCQ5TGI0 409 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 RNF43Q68DV7 783 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 OVOS1Q6IE37 1185 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 LRRC8BQ6P9F7 803 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 CD300LGQ6UXG3 332 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 ZNF534Q76KX8 674 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 BHLHA9Q7RTU4 235 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 TRPM8Q7Z2W7 1104 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 LRRC6Q86X45 466 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 BANPQ8N9N5 519 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 COLGALT1Q8NBJ5 622 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 RNF169Q8NCN4 708 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 LRRC8CQ8TDW0 803 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 APOPT1Q96IL0 206 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 PITPNM3Q9BZ71 974 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 MLXIPLQ9NP71 852 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 HAUS2Q9NVX0 235 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 DDIT4Q9NX09 232 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 CACNG4Q9UBN1 327 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
POLR2J3-201ENST00000379340 SYNJ2BP-COX16A0A087WUM0 186 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 ERI2A8K979 691 aaKnown RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 H0YHG0 523 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 RNF103O00237 685 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 DNAJC8O75937 253 aaPredicted RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 KRT38O76015 456 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 C1QAP02745 245 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 SNRPAP09012 282 aaKnown RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 ERCC2P18074 760 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 IGFBP6P24592 240 aaPredicted RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 FOXN2P32314 431 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 RPA3P35244 121 aaPredicted RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 BRCC3P46736 316 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 COG7P83436 770 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 ZNF33AQ06730 810 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 AP1B1Q10567 949 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 STEAP4Q687X5 459 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 ZNF449Q6P9G9 518 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 LVRNQ6Q4G3 990 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 UNC5AQ6ZN44 842 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 DENND5BQ6ZUT9 1274 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 AGGF1Q8N302 714 aaeCLIP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 URGCPQ8TCY9 931 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 MRRFQ96E11 262 aaKnown RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 P2RY11Q96G91 374 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 GLT1D1Q96MS3 346 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms