RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 C4orf22Q6V702 233 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 TLCD1Q96CP7 247 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 PGM2Q96G03 612 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 HERC2P3Q9BVR0 1158 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 TTLL2Q9BWV7 592 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 KLC2Q9H0B6 622 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 IL23AQ9NPF7 189 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 NOVA2Q9UNW9 492 aaKnown RBP17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 RAD54BQ9Y620 910 aa17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 MYO18AQ92614 2054 aaKnown RBP17.88■□□□□ 0.45
THUMPD2-201ENST00000378727 A0A0A0MRY4 1105 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 RASGRF2O14827 1237 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 PPP1R12AO14974 1030 aaPredicted RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ABLIM3O94929 683 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 MOCS2O96007 188 aaPredicted RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ABHD2P08910 425 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 HOXC13P31276 330 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 PSEN1P49768 467 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ANKRD20A2Q5SQ80 823 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ANKRD20A1Q5TYW2 823 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ANKRD20A3Q5VUR7 823 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 PDZD4Q76G19 769 aaPredicted RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ANKMY2Q8IV38 441 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 CCNYQ8ND76 341 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 SPATA13Q96N96 652 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ROPN1BQ9BZX4 212 aaPredicted RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ROPN1Q9HAT0 212 aaPredicted RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 SPG21Q9NZD8 308 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 AFF4Q9UHB7 1163 aaKnown RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ZMYND8Q9ULU4 1186 aaPredicted RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 HS3ST4Q9Y661 456 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 RNF103O00237 685 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 EIF3HO15372 352 aaKnown RBP eCLIP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 HSPA1AP0DMV8 641 aaKnown RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 HSPA1BP0DMV9 641 aaKnown RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 NR1D1P20393 614 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 TBX4P57082 545 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 WASHC5Q12768 1159 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 AUHQ13825 339 aaKnown RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 SKIDA1Q1XH10 827 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 C6orf118Q5T5N4 469 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 EMC10Q5UCC4 262 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 RWDD4Q6NW29 188 aaKnown RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 UBE2Q1Q7Z7E8 422 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 DDX53Q86TM3 631 aaKnown RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ZNF461Q8TAF7 563 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 TTC25Q96NG3 672 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 MAGED2Q9UNF1 606 aaPredicted RBP17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 ALPK3Q96L96 1907 aa17.87■□□□□ 0.45
THUMPD2-201ENST00000378727 CLUHO75153 1309 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 TUFMP49411 452 aaKnown RBP17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 GALNT2Q10471 571 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 PIK3R6Q5UE93 754 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 ARHGEF18Q6ZSZ5 1173 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 C14orf80Q86SX3 495 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 PDIK1LQ8N165 341 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 VPS52Q8N1B4 723 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 PKNOX2Q96KN3 472 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 YME1L1Q96TA2 773 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 CEP41Q9BYV8 373 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 NCAM2O15394 837 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 TCEA3O75764 348 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 APRTP07741 180 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 MLLT6P55198 1093 aaPredicted RBP17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 GPX6P59796 221 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 MAGOHP61326 146 aaKnown RBP17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 PPIDQ08752 370 aaKnown RBP17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 BBS9Q3SYG4 887 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 TNFAIP8L3Q5GJ75 292 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 C10orf120Q5SQS8 335 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 KDM7AQ6ZMT4 941 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 CROCCP2Q86T23 111 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 AGGF1Q8N302 714 aaeCLIP17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 AUTS2Q8WXX7 1259 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 CEP295NLQ96MC4 621 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 SERPINB12Q96P63 405 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 UBE2OQ9C0C9 1292 aaKnown RBP17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 CCSER2Q9H7U1 834 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 OLA1Q9NTK5 396 aaKnown RBP17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 PSD3Q9NYI0 1048 aa17.86■□□□□ 0.45
THUMPD2-201ENST00000378727 SHROOM3Q8TF72 1996 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 RGS16O15492 202 aaPredicted RBP17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 AVILO75366 819 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 CAPN2P17655 700 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 HTR7P34969 479 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 SERPINB6P35237 376 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 GARSP41250 739 aaKnown RBP17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 IFI35P80217 286 aaPredicted RBP17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 SKOR1P84550 965 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 NRG1Q02297 640 aaPredicted RBP17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 CBLBQ13191 982 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 SEMA5AQ13591 1074 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 TRIP4Q15650 581 aaPredicted RBP17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 CAND1Q86VP6 1230 aaKnown RBP17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 MIB1Q86YT6 1006 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 IGDCC3Q8IVU1 814 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 DEPDC1BQ8WUY9 529 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 HDAC11Q96DB2 347 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 TBC1D31Q96DN5 1066 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms