RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 POPDC2Q9HBU9 364 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 VANGL2Q9ULK5 521 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SRRM3A6NNA2 597 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 KCNK1O00180 336 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 CLK1P49759 484 aaKnown RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 TUBP50607 506 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RENBPP51606 427 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 DPYSL3Q14195 570 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 LZTR1Q8N653 840 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SNX31Q8N9S9 440 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 ACOT9Q9Y305 439 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SIGLEC16A6NMB1 481 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 CLASP2O75122 1294 aaKnown RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 BANF1O75531 89 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 JAM2P57087 298 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 TFAP2DQ7Z6R9 452 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 BRD8Q9H0E9 1235 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RNF208Q9H0X6 261 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SCUBE2Q9NQ36 999 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RUVBL2Q9Y230 463 aaKnown RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 NR2E1Q9Y466 385 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 IGLV3-22A0A075B6J6 115 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SPDYE5A6NIY4 337 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 TRPC5OSA6NMA1 111 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 TOMM70O94826 608 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 CRTAMO95727 393 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RBL1P28749 1068 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SCNN1BP51168 640 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 C15orf59Q2T9L4 293 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 WSCD1Q658N2 575 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RGMBQ6NW40 437 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 KCNT2Q6UVM3 1135 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 TERB1Q8NA31 727 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 UCMAQ8WVF2 138 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 CCDC126Q96EE4 140 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 ARMCX1Q9P291 453 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 MAGEB16A2A368 324 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 CCNE2O96020 404 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 SERPINF2P08697 491 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 MLH1P40692 756 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 SGO1Q5FBB7 561 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 ACBD5Q5T8D3 534 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 EEF1DP3Q658K8 133 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 ABHD15Q6UXT9 468 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 ITIH5Q86UX2 942 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 ZBTB10Q96DT7 871 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 NR1H4Q96RI1 486 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 FCHO1O14526 889 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 ZSCAN9O15535 394 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 FARP2O94887 1054 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 YBX3P16989 372 aaKnown RBP eCLIP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 SERPINB5P36952 375 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 HSDL1Q3SXM5 330 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 TTC33Q6PID6 262 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 HORMAD1Q86X24 394 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 HERC6Q8IVU3 1022 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 C12orf56Q8IXR9 622 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 RFWD2Q8NHY2 731 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 APOPT1Q96IL0 206 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 TBC1D13Q9NVG8 400 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 C2CD2Q9Y426 696 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 XPO1O14980 1071 aaKnown RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 MSCO60682 206 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 CDH17Q12864 832 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 NPNTQ6UXI9 565 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 HSFY1Q96LI6 401 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 PDGFDQ9GZP0 370 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 PAPOLBQ9NRJ5 636 aaKnown RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 TMEM39AQ9NV64 488 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 SPEF2Q9C093 1822 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 SKAP2O75563 359 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 USP17L7P0C7H9 530 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 ASTE1Q2TB18 679 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-201ENST00000378156 SLC39A12Q504Y0 691 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 KAT2BQ92831 832 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 MFSD14AQ96MC6 490 aa15.37■□□□□ 0.05
NPHP4-201ENST00000378156 OPLAHO14841 1288 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 GJB1P08034 283 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 NOS2P35228 1153 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 STX5Q13190 355 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 RETSATQ6NUM9 610 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 TRIM69Q86WT6 500 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 MICU2Q8IYU8 434 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 ADGRE3Q9BY15 652 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 TRHDEQ9UKU6 1024 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 E9PBE3 544 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 KLHL41O60662 606 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 SNUPNO95149 360 aaKnown RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 OR1E1P30953 314 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 TUFMP49411 452 aaKnown RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 DEPDC1Q5TB30 811 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 CAAP1Q9H8G2 361 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 RHBDL2Q9NX52 303 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 SYBUQ9NX95 663 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 WWOXQ9NZC7 414 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 MPP6Q9NZW5 540 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 TAGLN3Q9UI15 199 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 R3HDM2Q9Y2K5 976 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms