RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CLK2P49760 499 aaKnown RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 TMEM132DQ14C87 1099 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 SLC14A2Q15849 920 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 PCID2Q5JVF3 399 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 C2orf15Q8WU43 125 aaKnown RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 A0A0A0MRY4 1105 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 PKNOX1P55347 436 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 RAVER1Q8IY67 606 aaKnown RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 MYO19Q96H55 970 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 SPATA13Q96N96 652 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 EIF3FO00303 357 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 IL6P05231 212 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 NXNQ6DKJ4 435 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 THAP2Q9H0W7 228 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 FLT3P36888 993 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 TMBIM6P55061 237 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 USP49Q70CQ1 688 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 SPATA16Q9BXB7 569 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 ABHD16BQ9H3Z7 469 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 TAF4O00268 1085 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 ALDH1A3P47895 512 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 LONRF1Q17RB8 773 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 IPCEF1Q8WWN9 437 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 AGO4Q9HCK5 861 aaKnown RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 ATP13A1Q9HD20 1204 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 ZDHHC18Q9NUE0 388 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 MTF2Q9Y483 593 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 ZMYND10O75800 440 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 UQCRBP14927 111 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 RAB14P61106 215 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CNTN2Q02246 1040 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CDC42EP5Q6NZY7 148 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SLC26A9Q7LBE3 791 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 GSPT2Q8IYD1 628 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 BORCS5Q969J3 196 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 IFT43Q96FT9 208 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 RARAP10276 462 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PIK3R1P27986 724 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 FAM172AQ8WUF8 416 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TEFMQ96QE5 360 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CFLARO15519 480 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 MARK2Q7KZI7 788 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 AP1G1O43747 822 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ATP4BP51164 291 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DCAF6Q58WW2 860 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 GPAT2Q6NUI2 795 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 BRSK2Q8IWQ3 736 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CLYBLQ8N0X4 340 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PPM1NQ8N819 430 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 UNC93B1Q9H1C4 597 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 RGS18Q9NS28 235 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ASGR1P07306 291 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 KCNA3P22001 575 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 NR4A1P22736 598 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PBX3P40426 434 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 VARS2Q5ST30 1063 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ERICH5Q6P6B1 374 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PAFAH2Q99487 392 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ANAPC2Q9UJX6 822 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SLIT3O75094 1523 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 MYCLP12524 364 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 MAML1Q92585 1016 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 COA7Q96BR5 231 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SCYL1Q96KG9 808 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TRIB3Q96RU7 358 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PRDX5P30044 214 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CACNB3P54284 484 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 FAM228AQ86W67 206 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 FLCNQ8NFG4 579 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 HSD3B7Q9H2F3 369 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CACNB4O00305 520 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 MSCO60682 206 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CEP78Q5JTW2 689 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 NEK5Q6P3R8 708 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PDZD8Q8NEN9 1154 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 NEDD4LQ96PU5 975 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 MAGEL2Q9UJ55 1249 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 C21orf59P57076 290 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ULK4Q96C45 1275 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF514Q96K75 400 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DNAJC18Q9H819 358 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DYRK4Q9NR20 520 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DUSP10Q9Y6W6 482 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ADGRB2O60241 1585 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CDH5P33151 784 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 VSTM1Q6UX27 236 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 LRRC47Q8N1G4 583 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PPP3R2Q96LZ3 170 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TRPM5Q9NZQ8 1165 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SLC18A2Q05940 514 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 GJD4Q96KN9 370 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SENP6Q9GZR1 1112 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PCDH18Q9HCL0 1135 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 UGT2B11O75310 529 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 H6PDO95479 791 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 FGFR1P11362 822 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 INPP1P49441 399 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CYP4A11Q02928 519 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 LRRC41Q15345 812 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms