RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 GPR15P49685 360 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 BRMS1LQ5PSV4 323 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 COL13A1Q5TAT6 717 aaPredicted RBP17.31■□□□□ 0.36
HLA-A-202ENST00000376806 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 CCNYQ8ND76 341 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 STKLD1Q8NE28 680 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 MRRFQ96E11 262 aaKnown RBP17.31■□□□□ 0.36
HLA-A-202ENST00000376806 PAFAH2Q99487 392 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 FAM107BQ9H098 131 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 NMUR1Q9HB89 426 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 KCNK9Q9NPC2 374 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 SEPT10Q9P0V9 454 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 A0A1W2PQH9 124 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 CXCL10P02778 98 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 WASHC5Q12768 1159 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 FUT10Q6P4F1 479 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 NUP93Q8N1F7 819 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 COLGALT1Q8NBJ5 622 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 CASP10Q92851 521 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 LRRC39Q96DD0 335 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 CFAP36Q96G28 342 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 B3GALT6Q96L58 329 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 PGLYRP2Q96PD5 576 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 PRMT1Q99873 361 aaKnown RBP17.31■□□□□ 0.36
HLA-A-202ENST00000376806 OSBPL2Q9H1P3 480 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 HIPK3Q9H422 1215 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 XAB2Q9HCS7 855 aaKnown RBP17.31■□□□□ 0.36
HLA-A-202ENST00000376806 SCML2Q9UQR0 700 aa17.31■□□□□ 0.36
HLA-A-202ENST00000376806 TCRBV9S1A1TA0A576 114 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 NCAM2O15394 837 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 MSI1O43347 362 aaKnown RBP17.3■□□□□ 0.36
HLA-A-202ENST00000376806 ALDH2P05091 517 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 KRT15P19012 456 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 EPHB2P29323 1055 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 SERPINB6P35237 376 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 ATN1P54259 1190 aaPredicted RBP17.3■□□□□ 0.36
HLA-A-202ENST00000376806 PPIDQ08752 370 aaKnown RBP17.3■□□□□ 0.36
HLA-A-202ENST00000376806 DDR2Q16832 855 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 ANKRD42Q8N9B4 389 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 MGARPQ8TDB4 240 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 CHMP6Q96FZ7 201 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 CYTH2Q99418 400 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 TMEM175Q9BSA9 504 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 CEP41Q9BYV8 373 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 EIF2B3Q9NR50 452 aaKnown RBP17.3■□□□□ 0.36
HLA-A-202ENST00000376806 SENP1Q9P0U3 644 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 SFMBT1Q9UHJ3 866 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 NEU3Q9UQ49 428 aa17.3■□□□□ 0.36
HLA-A-202ENST00000376806 NYNRINQ9P2P1 1898 aaKnown RBP17.3■□□□□ 0.36
HLA-A-202ENST00000376806 LTBP2Q14767 1821 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 TBKBP1A7MCY6 615 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 F5H423 210 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-202ENST00000376806 STX2P32856 288 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 IFNAR2P48551 515 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 CCL23P55773 120 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 GALNT2Q10471 571 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 MPP2Q14168 576 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 ADGRD1Q6QNK2 874 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 ANKRD33Q7Z3H0 272 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 ZNF567Q8N184 647 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 TTC9BQ8N6N2 239 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 HDAC11Q96DB2 347 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 TRABDQ9H4I3 376 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 FBXO44Q9H4M3 255 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 ZC3H7BQ9UGR2 993 aaKnown RBP17.29■□□□□ 0.36
HLA-A-202ENST00000376806 TTLL3Q9Y4R7 772 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 DOCK4Q8N1I0 1966 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 EBAG9O00559 213 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 CPP00450 1065 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 CPB1P15086 417 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 MX2P20592 715 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 DRD4P21917 467 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 PSMB4P28070 264 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 CCR1P32246 355 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 CDK16Q00536 496 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 ELAVL2Q12926 359 aaKnown RBP17.29■□□□□ 0.36
HLA-A-202ENST00000376806 LRRC14Q15048 493 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 ATAD1Q8NBU5 361 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 DCAKDQ8WVC6 231 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 DYDC1Q8WWB3 177 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 ZNF317Q96PQ6 595 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-202ENST00000376806 HAPLN3Q96S86 360 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 PPP1R12CQ9BZL4 782 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 BRD8Q9H0E9 1235 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 OSER1Q9NX31 292 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 IGSF9Q9P2J2 1179 aa17.29■□□□□ 0.36
HLA-A-202ENST00000376806 PIAS1O75925 651 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 GALTP07902 379 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 PTPN3P26045 913 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 PBX3P40426 434 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 MSH2P43246 934 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 USP46P62068 366 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 SARNPP82979 210 aaKnown RBP17.28■□□□□ 0.36
HLA-A-202ENST00000376806 PPP2R5DQ14738 602 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 QPCTQ16769 361 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 KBTBD12Q3ZCT8 623 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 MSANTD2Q6P1R3 559 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 MON1AQ86VX9 555 aa17.28■□□□□ 0.36
HLA-A-202ENST00000376806 TMEM173Q86WV6 379 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms