RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 PCDH10Q9P2E7 1040 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 TLR6Q9Y2C9 796 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 A0A0A0MRY4 1105 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 KCNU1A8MYU2 1149 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 NCAM2O15394 837 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 APRTP07741 180 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 SRGAP2BP0DMP2 458 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ACRP10323 421 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ATF6P18850 670 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 PSEN1P49768 467 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 MTM1Q13496 603 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 BTG3Q14201 252 aaPredicted RBP18.22■□□□□ 0.51
CTTN-203ENST00000376561 STAT4Q14765 748 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ANKRD20A2Q5SQ80 823 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ANKRD20A1Q5TYW2 823 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ANKRD20A3Q5VUR7 823 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 PPP1R21Q6ZMI0 780 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ARHGEF18Q6ZSZ5 1173 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 TMEM199Q8N511 208 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 SPATA13Q96N96 652 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 SERPINB12Q96P63 405 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 FERMT1Q9BQL6 677 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 NEU3Q9UQ49 428 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 A0A087WUV0 522 aaPredicted RBP18.21■□□□□ 0.51
CTTN-203ENST00000376561 SERPINB6P35237 376 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 TNFAIP8L3Q5GJ75 292 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 GIPC2Q8TF65 315 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 PYROXD1Q8WU10 500 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 SLC39A13Q96H72 371 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 TMEM169Q96HH4 297 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 FCRL2Q96LA5 508 aaPredicted RBP18.21■□□□□ 0.51
CTTN-203ENST00000376561 CLSTN3Q9BQT9 956 aa18.21■□□□□ 0.51
CTTN-203ENST00000376561 WDR83Q9BRX9 315 aaKnown RBP18.21■□□□□ 0.51
CTTN-203ENST00000376561 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.21■□□□□ 0.51
CTTN-203ENST00000376561 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
CTTN-203ENST00000376561 RNF103O00237 685 aa18.21■□□□□ 0.5
CTTN-203ENST00000376561 STK10O94804 968 aaKnown RBP18.21■□□□□ 0.5
CTTN-203ENST00000376561 AGTP01019 485 aa18.21■□□□□ 0.5
CTTN-203ENST00000376561 BBS9Q3SYG4 887 aa18.21■□□□□ 0.5
CTTN-203ENST00000376561 MANEALQ5VSG8 457 aa18.21■□□□□ 0.5
CTTN-203ENST00000376561 CMTR2Q8IYT2 770 aaKnown RBP18.21■□□□□ 0.5
CTTN-203ENST00000376561 ARFGAP2Q8N6H7 521 aa18.21■□□□□ 0.5
CTTN-203ENST00000376561 CCDC77Q9BR77 488 aa18.21■□□□□ 0.5
CTTN-203ENST00000376561 FRMD8Q9BZ67 464 aaPredicted RBP18.21■□□□□ 0.5
CTTN-203ENST00000376561 VPS37BQ9H9H4 285 aa18.21■□□□□ 0.5
CTTN-203ENST00000376561 MRPL42Q9Y6G3 142 aaKnown RBP18.21■□□□□ 0.5
CTTN-203ENST00000376561 NUP205Q92621 2012 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 SLC38A8A6NNN8 435 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 MOCS2O96007 188 aaPredicted RBP18.2■□□□□ 0.5
CTTN-203ENST00000376561 IVLP07476 585 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 IFI35P80217 286 aaPredicted RBP18.2■□□□□ 0.5
CTTN-203ENST00000376561 WASHC5Q12768 1159 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 EFEMP1Q12805 493 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 RWDD4Q6NW29 188 aaKnown RBP18.2■□□□□ 0.5
CTTN-203ENST00000376561 FBXO36Q8NEA4 188 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 TMEM106CQ9BVX2 250 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 OLA1Q9NTK5 396 aaKnown RBP18.2■□□□□ 0.5
CTTN-203ENST00000376561 CLUHO75153 1309 aa18.2■□□□□ 0.5
CTTN-203ENST00000376561 OPHN1O60890 802 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 TBX18O95935 607 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 SLC2A3P11169 496 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 LAG3P18627 525 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 MX2P20592 715 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 HOXC13P31276 330 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 HTR7P34969 479 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 TUFMP49411 452 aaKnown RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 TBX4P57082 545 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 GPX6P59796 221 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 DSG1Q02413 1049 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 PPIDQ08752 370 aaKnown RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 GALNT2Q10471 571 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 CBLBQ13191 982 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 SEMA5AQ13591 1074 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 ARTNQ5T4W7 220 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 CAPN12Q6ZSI9 719 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 HDAC11Q96DB2 347 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 CEP295NLQ96MC4 621 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 TTLL2Q9BWV7 592 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 CAPS2Q9BXY5 557 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 BRD8Q9H0E9 1235 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 STMN4Q9H169 189 aaPredicted RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 SEPT10Q9P0V9 454 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 AFF4Q9UHB7 1163 aaKnown RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 MYO18AQ92614 2054 aaKnown RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 SHOX2O60902 331 aaPredicted RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 ZNF189O75820 626 aaPredicted RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 ZDHHC11BP0C7U3 371 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 CAPN2P17655 700 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 TPSB2P20231 275 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 PPP2R2AP63151 447 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 TPSAB1Q15661 275 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 ATP11CQ8NB49 1132 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 COLGALT1Q8NBJ5 622 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 MCUQ8NE86 351 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 TBC1D31Q96DN5 1066 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 CTNNAL1Q9UBT7 734 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 MAGED2Q9UNF1 606 aaPredicted RBP18.19■□□□□ 0.5
CTTN-203ENST00000376561 HS3ST4Q9Y661 456 aa18.19■□□□□ 0.5
CTTN-203ENST00000376561 E7EVH7 732 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms