RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 VAV1P15498 845 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 MUTP22033 750 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 PPP2R1BP30154 601 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 NRF1Q16656 503 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 AP5B1Q2VPB7 878 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 FAM98BQ52LJ0 330 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 DSG4Q86SJ6 1040 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 STK32CQ86UX6 486 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 C3orf20Q8ND61 904 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 ACTL9Q8TC94 416 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 KIFC1Q9BW19 673 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 AGO4Q9HCK5 861 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 FAM50BQ9Y247 325 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 CYP2A7P20853 494 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 TAF13Q15543 124 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 TSC22D1Q15714 1073 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 NBPF12Q5TAG4 269 aaPredicted RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 HLA-DQA1Q5Y7H0 255 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 ST13P5Q8NFI4 369 aaPredicted RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 LACRTQ9GZZ8 138 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 POLR1BQ9H9Y6 1135 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 SAE1Q9UBE0 346 aaPredicted RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 DRG1Q9Y295 367 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 TP73O15350 636 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 ATP6V1G2O95670 118 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 ADSLP30566 484 aaPredicted RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 PKN2Q16513 984 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 SLC39A12Q504Y0 691 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 CNPY3Q9BT09 278 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 PAIP1Q9H074 479 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 TMA7Q9Y2S6 64 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 GAKO14976 1311 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 ATXN2Q99700 1313 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 SMIM31A0A1B0GVY4 71 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 PSMD11O00231 422 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 CES2O00748 559 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 MAGEA10P43363 369 aaPredicted RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 EIF2B2P49770 351 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
COL4A1-201ENST00000375820 EID3Q8N140 333 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 CYP2W1Q8TAV3 490 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 SPATA20Q8TB22 786 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 MAP3K14Q99558 947 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 TOR4AQ9NXH8 423 aa14□□□□□ -0.17
COL4A1-201ENST00000375820 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 OR6A2O95222 327 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 IFNA14P01570 189 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 ZNF37AP17032 561 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 OVOS1Q6IE37 1185 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 ZNF280DQ6N043 979 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 R3HCC1LQ7Z5L2 792 aaKnown RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 MILR1Q7Z6M3 343 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 CYP4X1Q8N118 509 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 VPS33AQ96AX1 596 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 BPIFA1Q9NP55 256 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 GPR75-ASB3A0A0A6YYF3 556 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 H3BQF6 201 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 CSF1RP07333 972 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 FASP25445 335 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 CD151P48509 253 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 ZCCHC8Q6NZY4 707 aaKnown RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 SYT15Q9BQS2 421 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 PRDM15P57071 1507 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 KPNA3O00505 521 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 GMFGO60234 142 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 ETS1P14921 441 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 TSPAN8P19075 237 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 SLC25A24Q6NUK1 477 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 IL27RAQ6UWB1 636 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 CLVS1Q8IUQ0 354 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 FAM45AQ8TCE6 357 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 ADAM30Q9UKF2 790 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 NDUFAF1Q9Y375 327 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 FAM205AQ6ZU69 1335 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 RAMP2O60895 175 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 PROSCO94903 275 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 LHX1P48742 406 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 TOB1P50616 345 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 KYQ8NBH2 561 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 RSPH1Q8WYR4 309 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 GINS4Q9BRT9 223 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 TBC1D13Q9NVG8 400 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 COG5Q9UP83 839 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 PHGDHO43175 533 aaKnown RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 OR6B1O95007 311 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 CBX6O95503 412 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 PAICSP22234 425 aaKnown RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 SKIV2L2P42285 1042 aaKnown RBP13.99□□□□□ -0.17
COL4A1-201ENST00000375820 DHFR2Q86XF0 187 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 PALB2Q86YC2 1186 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 FBXO30Q8TB52 745 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 NSMCE2Q96MF7 247 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 MRGBPQ9NV56 204 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 RAD54BQ9Y620 910 aa13.99□□□□□ -0.17
COL4A1-201ENST00000375820 ZMPSTE24O75844 475 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 MFN2O95140 757 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms