RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TELO2Q9Y4R8 837 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 CDY1Q9Y6F8 540 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 LRCH4O75427 683 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 HDCP19113 662 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 DDX39BQ13838 428 aaKnown RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ZCCHC9Q8N567 271 aaKnown RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 SLC4A11Q8NBS3 891 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 FTHL17Q9BXU8 183 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ILKAPQ9H0C8 392 aaPredicted RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ALS2Q96Q42 1657 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 ERI2A8K979 691 aaKnown RBP18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 CHUKO15111 745 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 ANGPT2O15123 496 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 MSI1O43347 362 aaKnown RBP18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 SLC24A5Q71RS6 500 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 NLRP9Q7RTR0 991 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 LONP2Q86WA8 852 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 LZTR1Q8N653 840 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 FOPNLQ96NB1 174 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 MTO1Q9Y2Z2 717 aaKnown RBP18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 URB1O60287 2271 aaKnown RBP18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 CHRNB2P17787 502 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 PHF21BQ96EK2 531 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 KLC4Q9NSK0 619 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 AVILO75366 819 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 GLP2RO95838 553 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 KCNA4P22459 653 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 MAXP61244 160 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 POU4F1Q01851 419 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 DUPD1Q68J44 220 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 EXOC2Q96KP1 924 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 UBE2OQ9C0C9 1292 aaKnown RBP18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 IGFLR1Q9H665 355 aa18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 NOCTQ9UK39 431 aaKnown RBP18.4■□□□□ 0.54
PTPDC1-202ENST00000375360 SYNDIG1LA6NDD5 238 aa18.39■□□□□ 0.54
PTPDC1-202ENST00000375360 CFAP73A6NFT4 308 aa18.39■□□□□ 0.54
PTPDC1-202ENST00000375360 AOC2O75106 756 aa18.39■□□□□ 0.54
PTPDC1-202ENST00000375360 KCNMB4Q86W47 210 aa18.39■□□□□ 0.54
PTPDC1-202ENST00000375360 TOP6BLQ8N6T0 577 aa18.39■□□□□ 0.54
PTPDC1-202ENST00000375360 DBF4BQ8NFT6 615 aa18.39■□□□□ 0.54
PTPDC1-202ENST00000375360 MRPL17Q9NRX2 175 aaKnown RBP18.39■□□□□ 0.54
PTPDC1-202ENST00000375360 MYBPHLA2RUH7 354 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 MDM4O15151 490 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 LZTS3O60299 673 aaPredicted RBP18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 VNN1O95497 513 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 CPA3P15088 417 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 SERPINB8P50452 374 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 ITGA9Q13797 1035 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 HERC6Q8IVU3 1022 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 PARP9Q8IXQ6 854 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 PKD2L2Q9NZM6 624 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 DCDC2Q9UHG0 476 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 PLA2G4CQ9UP65 541 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 HEATR9A2RTY3 570 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 PIRTP0C851 137 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 PWP2Q15269 919 aaKnown RBP18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 LHX5Q9H2C1 402 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 TRHDEQ9UKU6 1024 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 AURKCQ9UQB9 309 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 DNAJC16Q9Y2G8 782 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 A0A0A0MRY4 1105 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 MAP2K7O14733 419 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 XPO1O14980 1071 aaKnown RBP18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 PRPF4O43172 522 aaKnown RBP eCLIP18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 FGFR1P11362 822 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 CKBP12277 381 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 SP100P23497 879 aaPredicted RBP18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 GP5P40197 560 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 FAM182AQ5T1J6 154 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 XYLT1Q86Y38 959 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 SPATA13Q96N96 652 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 TM6SF2Q9BZW4 377 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 CNGB3Q9NQW8 809 aa18.39■□□□□ 0.53
PTPDC1-202ENST00000375360 TLR5O60602 858 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 CRTAMO95727 393 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 PDHA1P08559 390 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 OLFML2BQ68BL8 750 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 C16orf46Q6P387 395 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 DENND1CQ8IV53 801 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 ALLCQ8N6M5 410 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 MTBPQ96DY7 904 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 PCDH18Q9HCL0 1135 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 NUP98P52948 1817 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 NFKB1P19838 968 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 PLK1P53350 603 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 AQP5P55064 265 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 HECTD3Q5T447 861 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 N4BP2L1Q5TBK1 243 aaPredicted RBP18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 ZCCHC23Q6ZST2 131 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 MON1BQ7L1V2 547 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 POLNQ7Z5Q5 900 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 PLEKHO2Q8TD55 490 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 FCRL2Q96LA5 508 aaPredicted RBP18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 FAM167BQ9BTA0 163 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 ADGRE3Q9BY15 652 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 CLPBQ9H078 707 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 COQ4Q9Y3A0 265 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms