RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ADRA1DP25100 572 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 AP1B1Q10567 949 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 SYPL2Q5VXT5 272 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 RNF43Q68DV7 783 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 PRPF39Q86UA1 669 aaKnown RBP12.46□□□□□ -0.41
HMGCL-202ENST00000374487 CCNYQ8ND76 341 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 RNF139Q8WU17 664 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 ZNF75CPQ92670 426 aaPredicted RBP12.46□□□□□ -0.41
HMGCL-202ENST00000374487 LPPQ93052 612 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 THOC1Q96FV9 657 aaKnown RBP12.46□□□□□ -0.41
HMGCL-202ENST00000374487 NPY6RQ99463 290 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 LGMNQ99538 433 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 SYT15Q9BQS2 421 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 MFHAS1Q9Y4C4 1052 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 LCHNA4D1U4 455 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 ARL5CA6NH57 179 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.42
HMGCL-202ENST00000374487 FBXO21O94952 628 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 UPP2O95045 317 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 NEFHP12036 1026 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 TPSB2P20231 275 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 AFF1P51825 1210 aaKnown RBP12.46□□□□□ -0.42
HMGCL-202ENST00000374487 PITX1P78337 314 aaPredicted RBP12.46□□□□□ -0.42
HMGCL-202ENST00000374487 CBLBQ13191 982 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 SETDB1Q15047 1291 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 TPSAB1Q15661 275 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 TTC39BQ5VTQ0 682 aaPredicted RBP12.46□□□□□ -0.42
HMGCL-202ENST00000374487 KIAA0319Q5VV43 1072 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 DENND5BQ6ZUT9 1274 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 FITM2Q8N6M3 262 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 RNF169Q8NCN4 708 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 GSTCDQ8NEC7 633 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 SLC7A14Q8TBB6 771 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 NT5C3BQ969T7 300 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 RMDN2Q96LZ7 410 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 IQCGQ9H095 443 aaKnown RBP12.46□□□□□ -0.42
HMGCL-202ENST00000374487 XAB2Q9HCS7 855 aaKnown RBP12.46□□□□□ -0.42
HMGCL-202ENST00000374487 CRTAC1Q9NQ79 661 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 USP3Q9Y6I4 520 aa12.46□□□□□ -0.42
HMGCL-202ENST00000374487 A0A0A0MRY4 1105 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 GPR182O15218 404 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 DGKIO75912 1065 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 APOEP02649 317 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 GSTA2P09210 222 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 PYGBP11216 843 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ALDH3A1P30838 453 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 IKBKEQ14164 716 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ANKRD20A2Q5SQ80 823 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ANKRD20A1Q5TYW2 823 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ANKRD20A3Q5VUR7 823 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 CYB5D1Q6P9G0 228 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ECHDC2Q86YB7 292 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 PCED1BQ96HM7 432 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SERAC1Q96JX3 654 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SPATA13Q96N96 652 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 KCNK16Q96T55 309 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ULBP1Q9BZM6 244 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ECT2Q9H8V3 914 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 PIGVQ9NUD9 493 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SEPT10Q9P0V9 454 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SLC17A7Q9P2U7 560 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 TTLL3Q9Y4R7 772 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 PTPRSQ13332 1948 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 MYBPHLA2RUH7 354 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 CASTOR2A6NHX0 329 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 F5H423 210 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 EEF2KO00418 725 aaKnown RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 MFSD11O43934 449 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 FAM155BO75949 473 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SNRPAP09012 282 aaKnown RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 NCAM1P13591 858 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 FDFT1P37268 417 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SCNN1GP51170 649 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SEMA5AQ13591 1074 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 PDK1Q15118 436 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 GALNTL6Q49A17 601 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 UNC5AQ6ZN44 842 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 HFE2Q6ZVN8 426 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 FAM35AQ86V20 835 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 COLGALT1Q8NBJ5 622 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 ADAM32Q8TC27 787 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SEPT8Q92599 483 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 APOPT1Q96IL0 206 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 OLFM3Q96PB7 478 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 SLC2A13Q96QE2 648 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 EBNA1BP2Q99848 306 aaKnown RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 VPS11Q9H270 941 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 NKX2-4Q9H2Z4 354 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 C12orf65Q9H3J6 166 aaKnown RBP12.45□□□□□ -0.42
HMGCL-202ENST00000374487 CERS4Q9HA82 394 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 MIOSQ9NXC5 875 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms