RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 UNC5AQ6ZN44 842 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 CTU1Q7Z7A3 348 aaKnown RBP13.8□□□□□ -0.2
CSTF2-201ENST00000372972 LRRTM3Q86VH5 581 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 CTAGE3PQ8IX95 158 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 PPM1NQ8N819 430 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 GSDMBQ8TAX9 411 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 LRRC8CQ8TDW0 803 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 EIF2B3Q9NR50 452 aaKnown RBP13.8□□□□□ -0.2
CSTF2-201ENST00000372972 RGS18Q9NS28 235 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 PRKAG3Q9UGI9 489 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 STARD13Q9Y3M8 1113 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 I6L893 689 aaPredicted RBP13.79□□□□□ -0.2
CSTF2-201ENST00000372972 GOLGA8RI6L899 631 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 KRT37O76014 449 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 EOMESO95936 686 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 TYMPP19971 482 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 GRIA1P42261 906 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 SCTRP47872 440 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 CDK7P50613 346 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 TSPY1Q01534 308 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 DNAJC3Q13217 504 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 SPRED3Q2MJR0 410 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 CGB2Q6NT52 195 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 FAM47EQ6ZV65 393 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 RTN4RL1Q86UN2 441 aaPredicted RBP13.79□□□□□ -0.2
CSTF2-201ENST00000372972 MPP5Q8N3R9 675 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 NETO2Q8NC67 525 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 OR10T2Q8NGX3 314 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 TCP10LQ8TDR4 215 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 TRIM62Q9BVG3 475 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 SEPT10Q9P0V9 454 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 PCDHA11Q9Y5I1 949 aa13.79□□□□□ -0.2
CSTF2-201ENST00000372972 CXorf49A8MYA2 514 aaPredicted RBP13.78□□□□□ -0.2
CSTF2-201ENST00000372972 SNRPAP09012 282 aaKnown RBP13.78□□□□□ -0.2
CSTF2-201ENST00000372972 SLC18A2Q05940 514 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 SH2D5Q6ZV89 423 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 CYS1Q717R9 158 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 BEND5Q7L4P6 421 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
CSTF2-201ENST00000372972 SERAC1Q96JX3 654 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 TMEM209Q96SK2 561 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 KLF6Q99612 283 aaPredicted RBP13.78□□□□□ -0.2
CSTF2-201ENST00000372972 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 BRD8Q9H0E9 1235 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 TKTL2Q9H0I9 626 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 KLHL14Q9P2G3 628 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 SDR42E2A6NKP2 422 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 LPXNO60711 386 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 FAM155BO75949 473 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 AMHP03971 560 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 ITGB1P05556 798 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 GSTA1P08263 222 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 TTC31Q49AM3 519 aaPredicted RBP13.78□□□□□ -0.2
CSTF2-201ENST00000372972 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 PID1Q7Z2X4 250 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 ZNF75CPQ92670 426 aaPredicted RBP13.78□□□□□ -0.2
CSTF2-201ENST00000372972 APBB2Q92870 758 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 STAMBPL1Q96FJ0 436 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 EPAS1Q99814 870 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 VPS11Q9H270 941 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 PAK6Q9NQU5 681 aaPredicted RBP13.78□□□□□ -0.2
CSTF2-201ENST00000372972 ABCF3Q9NUQ8 709 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 IGSF9Q9P2J2 1179 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
CSTF2-201ENST00000372972 FAM159BA6NKW6 160 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 TRIM49D1C9J1S8 452 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
CSTF2-201ENST00000372972 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
CSTF2-201ENST00000372972 PYGBP11216 843 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 ADRA1DP25100 572 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 YWHAHQ04917 246 aaPredicted RBP13.77□□□□□ -0.21
CSTF2-201ENST00000372972 IFRD2Q12894 506 aaPredicted RBP13.77□□□□□ -0.21
CSTF2-201ENST00000372972 RNF43Q68DV7 783 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 C4orf50Q6ZRC1 276 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 LRRC8DQ7L1W4 858 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 SPATA2LQ8IUW3 424 aaPredicted RBP13.77□□□□□ -0.21
CSTF2-201ENST00000372972 CCNJLQ8IV13 435 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 TP53INP2Q8IXH6 220 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 GBP7Q8N8V2 638 aaPredicted RBP13.77□□□□□ -0.21
CSTF2-201ENST00000372972 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 LINC01599Q8WXQ3 324 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 RNF34Q969K3 372 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 APOPT1Q96IL0 206 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 CEP41Q9BYV8 373 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 SMYD2Q9NRG4 433 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 HAUS2Q9NVX0 235 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 MOCS1Q9NZB8 636 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 SLC17A7Q9P2U7 560 aa13.77□□□□□ -0.21
CSTF2-201ENST00000372972 F8W810 466 aa13.76□□□□□ -0.21
CSTF2-201ENST00000372972 KRT38O76015 456 aa13.76□□□□□ -0.21
CSTF2-201ENST00000372972 ALADP13716 330 aa13.76□□□□□ -0.21
CSTF2-201ENST00000372972 SELPP16109 830 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms