RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 GHRP10912 638 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 VAV1P15498 845 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 DNAJB2P25686 324 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 POU6F1Q14863 301 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 PTPAQ15257 358 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 TXNRD3Q86VQ6 643 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 KRT73Q86Y46 540 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 ASZ1Q8WWH4 475 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 DCLK3Q9C098 648 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 FBXO28Q9NVF7 368 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CAPN6Q9Y6Q1 641 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 STON1Q9Y6Q2 735 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 C15orf38-AP3S2A0A0A6YYH1 394 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 MYL12BO14950 172 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 KATNA1O75449 491 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ANXA6P08133 673 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 HOXC6P09630 235 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 GPR15P49685 360 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 FASTKQ14296 549 aaKnown RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 NDUFA5Q16718 116 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 SNX30Q5VWJ9 437 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ARMC3Q5W041 872 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 TMC7Q7Z402 723 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ARPINQ7Z6K5 226 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 MILR1Q7Z6M3 343 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 HEATR4Q86WZ0 1026 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 EMC1Q8N766 993 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 MIEF2Q96C03 454 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 SMARCD1Q96GM5 515 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 APOPT1Q96IL0 206 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 POP1Q99575 1024 aaKnown RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 SEPHS2Q99611 448 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 TBL1YQ9BQ87 522 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 SEMA6BQ9H3T3 888 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 RGS14O43566 566 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 GUCY1B2O75343 617 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 RTN3O95197 1032 aaPredicted RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 TTI2Q6NXR4 508 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 LPCAT2Q7L5N7 544 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 FBXO25Q8TCJ0 367 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 HASPINQ8TF76 798 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 FDXACB1Q9BRP7 624 aaPredicted RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 MID1IP1Q9NPA3 183 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 THAP1Q9NVV9 213 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 KBTBD4Q9NVX7 518 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 UBP1Q9NZI7 540 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 UXTQ9UBK9 157 aaPredicted RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 PRKAG3Q9UGI9 489 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ZMYM2Q9UBW7 1377 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 CCDC189A1A4V9 331 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 UBE2Q2LH0YL09 131 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ZNF24P17028 368 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ITGAXP20702 1163 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 CYP2A13Q16696 494 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ZNF571Q7Z3V5 609 aaPredicted RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 CACTIN-AS1Q8N1I8 211 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 HTR3CQ8WXA8 447 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 EHD4Q9H223 541 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 PIF1Q9H611 641 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 KLHL1Q9NR64 748 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 A0A087X1B8 175 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 PNMA8CA0A1B0GUJ8 204 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 CASTOR2A6NHX0 329 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 PDE9AO76083 593 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 MTA2O94776 668 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 CAPN1P07384 714 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 MAPK9P45984 424 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 PTENP60484 403 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 HERVK_113P62684 666 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ZNF57Q68EA5 555 aaPredicted RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 MCOLN2Q8IZK6 566 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ACTL9Q8TC94 416 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 NCKAP1Q9Y2A7 1128 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 ZNF135P52742 658 aaPredicted RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 ZFP1Q6P2D0 407 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 IKBIPQ70UQ0 350 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 SMIM5Q71RC9 77 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 PHF21BQ96EK2 531 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 NAALADL1Q9UQQ1 740 aa11.78□□□□□ -0.52
VCL-202ENST00000372755 TDRKHQ9Y2W6 561 aaKnown RBP11.78□□□□□ -0.52
VCL-202ENST00000372755 WDR27A2RRH5 827 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 DNALI1O14645 258 aaPredicted RBP11.77□□□□□ -0.52
VCL-202ENST00000372755 PHGDHO43175 533 aaKnown RBP11.77□□□□□ -0.52
VCL-202ENST00000372755 ATP9AO75110 1047 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 CXCL8P10145 99 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 UQCRBP14927 111 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 AXLP30530 894 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 OR1E1P30953 314 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 CDK7P50613 346 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.52
VCL-202ENST00000372755 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.52
VCL-202ENST00000372755 TPD52L3Q96J77 140 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.52
VCL-202ENST00000372755 QRFPRQ96P65 431 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms