RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ABRAXAS1Q6UWZ7 409 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 TUBA1AQ71U36 451 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
PTPN1-201ENST00000371621 ISOC1Q96CN7 298 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 CEP41Q9BYV8 373 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 SQORQ9Y6N5 450 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 hCG_1984214I3L0E3 225 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 GDF11O95390 407 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 TOP3BO95985 862 aaKnown RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ASNSP08243 561 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ABHD2P08910 425 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 COL6A2P12110 1019 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PHKA2P46019 1235 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 THOP1P52888 689 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 NAGLUP54802 743 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 NRLP54845 237 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 GPSM2P81274 684 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 CCDC149Q6ZUS6 474 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PID1Q7Z2X4 250 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 IQCF2Q8IXL9 164 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 LRRC15Q8TF66 581 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PHF21AQ96BD5 680 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 CACNA2D2Q9NY47 1150 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 SEL1LQ9UBV2 794 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 POU2F3Q9UKI9 436 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 NR5A2O00482 541 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 TEX28O15482 410 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PRLP01236 227 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 CALB1P05937 261 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 CSF1RP07333 972 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PABPC1P11940 636 aaKnown RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 GAD2Q05329 585 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PON2Q15165 354 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PITRM1Q5JRX3 1037 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ZC3H7AQ8IWR0 971 aaKnown RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 MCOLN2Q8IZK6 566 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 SFRP1Q8N474 314 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 FIG4Q92562 907 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 SHISA4Q96DD7 197 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PPP1R10Q96QC0 940 aaKnown RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ASPSCR1Q9BZE9 553 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 AAASQ9NRG9 546 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 FAM32AQ9Y421 112 aaKnown RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ATP6AP2A0A1C7CYW4 349 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 TRAFD1O14545 582 aaPredicted RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ATP6AP2O75787 350 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 DLDP09622 509 aaKnown RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 GRIA2P42262 883 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PRKAA2P54646 552 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 PPP3CAQ08209 521 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ADGRE1Q14246 886 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 NPY5RQ15761 445 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ANKRD22Q5VYY1 191 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 C10orf107Q8IVU9 208 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ZNF669Q96BR6 464 aaPredicted RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 ZNF668Q96K58 619 aaPredicted RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 HNRNPABQ99729 332 aaKnown RBP12.05□□□□□ -0.48
PTPN1-201ENST00000371621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.05□□□□□ -0.481e-6■■■■■ 27.9
PTPN1-201ENST00000371621 PPME1Q9Y570 386 aa12.05□□□□□ -0.48
PTPN1-201ENST00000371621 RGSL1A5PLK6 1076 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 VILLO15195 856 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 STIP1P31948 543 aaKnown RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 TNFAIP2Q03169 654 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 KCNJ8Q15842 424 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 CMPK2Q5EBM0 449 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 DNAJC14Q6Y2X3 702 aaPredicted RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 CYP4V2Q6ZWL3 525 aaPredicted RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 UBE2Q1Q7Z7E8 422 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 SLC22A16Q86VW1 577 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 UBE2J2Q8N2K1 259 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 LRRC39Q96DD0 335 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 PTCD3Q96EY7 689 aaKnown RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 FAM84BQ96KN1 310 aaPredicted RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 APBA2Q99767 749 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 COG4Q9H9E3 785 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 SIAEQ9HAT2 523 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 IGSF9Q9P2J2 1179 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 ZHX2Q9Y6X8 837 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 WTIPA6NIX2 430 aaPredicted RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 AURKAO14965 403 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 LIASO43766 372 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 BMP10O95393 424 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 HLA-DPA1P20036 260 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 MUTP22033 750 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 VARSP26640 1264 aaKnown RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 RPL22P35268 128 aaKnown RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 KRT6CP48668 564 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 POU5F1Q01860 360 aaKnown RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 GSTM4Q03013 218 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
PTPN1-201ENST00000371621 ERFEQ4G0M1 354 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 FNBP1LQ5T0N5 605 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 DEPDC1Q5TB30 811 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 IL23RQ5VWK5 629 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
PTPN1-201ENST00000371621 GALNT6Q8NCL4 622 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms