RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 FMN2Q9NZ56 1722 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 ENO4A6NNW6 628 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 MYO1GB0I1T2 1018 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 ERBB2P04626 1255 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 NPR3P17342 541 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 TPH1P17752 444 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 KCNA4P22459 653 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 CLK2P49760 499 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 AGKQ53H12 422 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 PSTKQ8IV42 348 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 P3H2Q8IVL5 708 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 SNRNP25Q9BV90 132 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 SPATA16Q9BXB7 569 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 FGFBP2Q9BYJ0 223 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 NMRAL1Q9HBL8 299 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 DCDC2CA8MYV0 355 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 ALOX15BO15296 676 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 MYL4P12829 197 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 FECHP22830 423 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 MMP8P22894 467 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 SLC34A1Q06495 639 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 PDK4Q16654 411 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 ZNF470Q6ECI4 717 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 ABHD15Q6UXT9 468 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 ADCK2Q7Z695 626 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 ACMSDQ8TDX5 336 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 SAE1Q9UBE0 346 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 CTNNAL1Q9UBT7 734 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 TMEM191CA6NGB0 347 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 URODP06132 367 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 FCGR1AP12314 374 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 CCDC130P13994 396 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 PSMC3P17980 439 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 YWHAQP27348 245 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 SCNN1BP51168 640 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 LRRC74AQ0VAA2 488 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 NFYCQ13952 458 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 FSCN1Q16658 493 aaKnown RBP12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 KLHL4Q9C0H6 718 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 TMEM161AQ9NX61 479 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 SNX13Q9Y5W8 968 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 IGKV6D-41A0A0C4DH26 115 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 RTN3O95197 1032 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 CYP1A1P04798 512 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 RPA3P35244 121 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 RNF43Q68DV7 783 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 HORMAD1Q86X24 394 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 TEKT4Q8WW24 435 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 HIC2Q96JB3 615 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 ASB2Q96Q27 587 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 GAD1Q99259 594 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 TKTL2Q9H0I9 626 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 MYLK2Q9H1R3 596 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 LHX5Q9H2C1 402 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 HSD3B7Q9H2F3 369 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 RMND5AQ9H871 391 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 POLG2Q9UHN1 485 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 LRCH1Q9Y2L9 728 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 SNCAIPQ9Y6H5 919 aa12.12□□□□□ -0.47
DEPDC1-201ENST00000370966 FGF10O15520 208 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 PPP3CCP48454 512 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 MSLNQ13421 630 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 SNX30Q5VWJ9 437 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 FAM183BPQ6ZVS7 135 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 EXOC3L1Q86VI1 746 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 PIWIL2Q8TC59 973 aaKnown RBP12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 PIK3R5Q8WYR1 880 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 TBC1D23Q9NUY8 699 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 TAS2R13Q9NYV9 303 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 HNRNPCL2B2RXH8 293 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 MAN1A2O60476 641 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 CALCAP01258 141 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ATP6V1B1P15313 513 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 OR1E1P30953 314 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 TNFSF9P41273 254 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ADAM32Q8TC27 787 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 COPS5Q92905 334 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 TSPAN18Q96SJ8 248 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ADGRA3Q8IWK6 1321 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 CBX4O00257 560 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 KDM1AO60341 852 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 B4GALT4O60513 344 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 SOX11P35716 441 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ANKS6Q68DC2 871 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 IZUMO2Q6UXV1 221 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 KAT2BQ92831 832 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 SEMA4DQ92854 862 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 VPS50Q96JG6 964 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 APBA2Q99767 749 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 NMRK2Q9NPI5 230 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 OR12D3Q9UGF7 316 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms