RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 FECHP22830 423 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 ADRA1BP35368 520 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 OPRD1P41143 372 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 MAGEA1P43355 309 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 TNFRSF4P43489 277 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 NUBP1P53384 320 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 HDAC4P56524 1084 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 KRT83P78385 493 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 KDSRQ06136 332 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 AUHQ13825 339 aaKnown RBP14.23□□□□□ -0.13
SSR4-202ENST00000370085 CWF19L1Q69YN2 538 aaKnown RBP14.23□□□□□ -0.13
SSR4-202ENST00000370085 NADSYN1Q6IA69 706 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 MFN1Q8IWA4 741 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 CCDC105Q8IYK2 499 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 UCMAQ8WVF2 138 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 CHFRQ96EP1 664 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 EIF3CQ99613 913 aaKnown RBP14.23□□□□□ -0.13
SSR4-202ENST00000370085 LMAN1LQ9HAT1 526 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 STIM2Q9P246 746 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 HS3ST4Q9Y661 456 aa14.23□□□□□ -0.13
SSR4-202ENST00000370085 A0A1B0GVM2 712 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 TCAF2A6NFQ2 919 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 H0Y626 953 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 MOCS3O95396 460 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 LCA5LO95447 670 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 DCNP07585 359 aaKnown RBP14.22□□□□□ -0.13
SSR4-202ENST00000370085 HOXD9P28356 352 aaPredicted RBP14.22□□□□□ -0.13
SSR4-202ENST00000370085 SLC6A4P31645 630 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 PCK1P35558 622 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 SLC6A11P48066 632 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 ATXN1P54253 815 aaKnown RBP14.22□□□□□ -0.13
SSR4-202ENST00000370085 CCINQ13939 588 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 GAB4Q2WGN9 574 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 TRMT11Q7Z4G4 463 aaKnown RBP14.22□□□□□ -0.13
SSR4-202ENST00000370085 ANKS1BQ7Z6G8 1248 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 CARNMT1Q8N4J0 409 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 TERB1Q8NA31 727 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 KCNV2Q8TDN2 545 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 WFIKKN2Q8TEU8 576 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 RFFLQ8WZ73 363 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 CLDN23Q96B33 292 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 CALR3Q96L12 384 aaKnown RBP14.22□□□□□ -0.13
SSR4-202ENST00000370085 PRRX2Q99811 253 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 EPAS1Q99814 870 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 PRMT1Q99873 361 aaKnown RBP14.22□□□□□ -0.13
SSR4-202ENST00000370085 LRFN3Q9BTN0 628 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 OSBPL2Q9H1P3 480 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 RETREG1Q9H6L5 497 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 DONSONQ9NYP3 566 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 CALCOCO1Q9P1Z2 691 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 XPO7Q9UIA9 1087 aaKnown RBP14.22□□□□□ -0.13
SSR4-202ENST00000370085 VANGL2Q9ULK5 521 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 SLC27A6Q9Y2P4 619 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 KIAA1549LQ6ZVL6 1849 aa14.22□□□□□ -0.13
SSR4-202ENST00000370085 A0A0A0MRY4 1105 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 SOWAHDA6NJG2 315 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 GFRA2O00451 464 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 TIMM44O43615 452 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 CLDN11O75508 207 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 CHRNB1P11230 501 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 AVPR2P30518 371 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 ARHGAP25P42331 645 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 RPS24P62847 133 aaKnown RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 NRG1Q02297 640 aaPredicted RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 SCAPQ12770 1279 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 ZNF177Q13360 481 aaPredicted RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 SLC12A1Q13621 1099 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 EIF4HQ15056 248 aaKnown RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 HADHQ16836 314 aaKnown RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 HSF5Q4G112 596 aaPredicted RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 SH3PXD2AQ5TCZ1 1133 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 FSTL4Q6MZW2 842 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 FBXL22Q6P050 247 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 CHST9Q7L1S5 443 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 C12orf40Q86WS4 652 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 PSTKQ8IV42 348 aaKnown RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 AHI1Q8N157 1196 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 NIPA2Q8N8Q9 360 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 FIBINQ8TAL6 211 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 ACDQ96AP0 544 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 ARHGEF26Q96DR7 871 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 PACSIN1Q9BY11 444 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 ADAM33Q9BZ11 813 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 C11orf16Q9NQ32 467 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 KIAA1522Q9P206 1035 aaPredicted RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 OR12D3Q9UGF7 316 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 FBXO10Q9UK96 956 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 MTF2Q9Y483 593 aaPredicted RBP14.21□□□□□ -0.13
SSR4-202ENST00000370085 PCDHA13Q9Y5I0 950 aa14.21□□□□□ -0.13
SSR4-202ENST00000370085 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
SSR4-202ENST00000370085 E9PAM4 449 aa14.2□□□□□ -0.14
SSR4-202ENST00000370085 NPC1O15118 1278 aa14.2□□□□□ -0.14
SSR4-202ENST00000370085 SRGAP2O75044 1071 aa14.2□□□□□ -0.14
SSR4-202ENST00000370085 LUC7L3O95232 432 aaKnown RBP14.2□□□□□ -0.14
SSR4-202ENST00000370085 EGFP01133 1207 aa14.2□□□□□ -0.14
SSR4-202ENST00000370085 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
SSR4-202ENST00000370085 HTR7P34969 479 aa14.2□□□□□ -0.14
SSR4-202ENST00000370085 SSR1P43307 286 aaKnown RBP14.2□□□□□ -0.14
SSR4-202ENST00000370085 NOP2P46087 812 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms