RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 NDC80O14777 642 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 PDK1Q15118 436 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 PDZD4Q76G19 769 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-202ENST00000369409 ZCCHC9Q8N567 271 aaKnown RBP17.32■□□□□ 0.36
PHGDH-202ENST00000369409 CPT1BQ92523 772 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 PRCCQ92733 491 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-202ENST00000369409 TBC1D31Q96DN5 1066 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 ALG13Q9NP73 1137 aaKnown RBP17.32■□□□□ 0.36
PHGDH-202ENST00000369409 ENTPD7Q9NQZ7 604 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 TMEM51Q9NW97 253 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 PAK5Q9P286 719 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-202ENST00000369409 MYO18AQ92614 2054 aaKnown RBP17.32■□□□□ 0.36
PHGDH-202ENST00000369409 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 ZNF840PA6NDX5 716 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 PPP1R12AO14974 1030 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 CXCL14O95715 111 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 IGLV3-27P01718 113 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 OAS2P29728 719 aaKnown RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 HOXC13P31276 330 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 SERPINB6P35237 376 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 BMPR1AP36894 532 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 AP1B1Q10567 949 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 PRKD1Q15139 912 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 UBAP2Q5T6F2 1119 aaKnown RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 ANKRD22Q5VYY1 191 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 PCGF5Q86SE9 256 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 PPIL6Q8IXY8 311 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 CCDC110Q8TBZ0 833 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 HTR3CQ8WXA8 447 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 TRMT2BQ96GJ1 504 aaKnown RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 MYRFLQ96LU7 910 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 CDK5RAP1Q96SZ6 601 aaKnown RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 TCF25Q9BQ70 676 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 EPB41L4BQ9H329 900 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 SEMA4AQ9H3S1 761 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 LINC01553A4QN01 128 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 E9PAM4 449 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 TGM5O43548 720 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 HTR7P34969 479 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 EPHB3P54753 998 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 HSP90B2PQ58FF3 399 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 SPDYCQ5MJ68 293 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 SNX30Q5VWJ9 437 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 SPRED2Q7Z698 418 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 C14orf80Q86SX3 495 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 CCNYQ8ND76 341 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 OR2W6PQ8NHA6 318 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 C17orf80Q9BSJ5 609 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 NACA2Q9H009 215 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 TSPYL1Q9H0U9 437 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 PABPC3Q9H361 631 aaKnown RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 CDC42EP4Q9H3Q1 356 aaKnown RBP17.31■□□□□ 0.36
PHGDH-202ENST00000369409 TRPM5Q9NZQ8 1165 aa17.31■□□□□ 0.36
PHGDH-202ENST00000369409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-202ENST00000369409 GOLGA8MH3BSY2 632 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 FGF10O15520 208 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-202ENST00000369409 TMEM63AO94886 807 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 SYF2O95926 243 aaKnown RBP17.3■□□□□ 0.36
PHGDH-202ENST00000369409 ADH1AP07327 375 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 ERVFC1P60507 584 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 NRG1Q02297 640 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-202ENST00000369409 GAD2Q05329 585 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 MS4A13Q5J8X5 152 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 HECTD3Q5T447 861 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 ARTNQ5T4W7 220 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 FAXCQ5TGI0 409 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 PLPP4Q5VZY2 271 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 TADA2BQ86TJ2 420 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 PSMG2Q969U7 264 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 BTN2A3PQ96KV6 586 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 MED4Q9NPJ6 270 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 RAB6BQ9NRW1 208 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 DNMT3LQ9UJW3 386 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 MAFFQ9ULX9 164 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 RAD54BQ9Y620 910 aa17.3■□□□□ 0.36
PHGDH-202ENST00000369409 TCRBV7S3A2A0A539 114 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 ATP5C1P36542 298 aaKnown RBP17.29■□□□□ 0.36
PHGDH-202ENST00000369409 TUBP50607 506 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 MLLT6P55198 1093 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-202ENST00000369409 RING1Q06587 406 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 DENND2CQ68D51 928 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 DNAJB7Q7Z6W7 309 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-202ENST00000369409 HOOK3Q86VS8 718 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 DPF3Q92784 378 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 P2RY11Q96G91 374 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 CELF6Q96J87 481 aaKnown RBP17.29■□□□□ 0.36
PHGDH-202ENST00000369409 C1orf74Q96LT6 269 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 KLHL5Q96PQ7 755 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 RBM15Q96T37 977 aaKnown RBP eCLIP17.29■□□□□ 0.364e-7■■■□□ 17.3
PHGDH-202ENST00000369409 FOXP3Q9BZS1 431 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 CATSPERBQ9H7T0 1116 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 SEPT10Q9P0V9 454 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 SLC12A6Q9UHW9 1150 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 LZTS1Q9Y250 596 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 H0YGN5 161 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms