RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TLR3O15455 904 aaKnown RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 UCHL3P15374 230 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PGDP52209 483 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 LSM3P62310 102 aaKnown RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 SP4Q02446 784 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 LGALS3BPQ08380 585 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 DRAP1Q14919 205 aaPredicted RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PLA2G4EQ3MJ16 856 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 DGKKQ5KSL6 1271 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 AMIGO1Q86WK6 493 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 P3H2Q8IVL5 708 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 NIM1KQ8IY84 436 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 CPXCR1Q8N123 301 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 RTL3Q8N8U3 475 aaKnown RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 ACTR3BQ9P1U1 418 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PSME2Q9UL46 239 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 MAFFQ9ULX9 164 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 TAF6LQ9Y6J9 622 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 SLC30A1Q9Y6M5 507 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 H0YGN5 161 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 ZBTB39O15060 712 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PLEKHA8P1O95397 391 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 CFBP00751 764 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 RPL35P42766 123 aaKnown RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 NAB1Q13506 487 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PKN1Q16512 942 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 CA9Q16790 459 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 ATP13A5Q4VNC0 1218 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 KCNT1Q5JUK3 1230 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 ALYREFQ86V81 257 aaKnown RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 RNF148Q8N7C7 305 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 APOPT1Q96IL0 206 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 CTRCQ99895 268 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 ADPRHL2Q9NX46 363 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 NFS1Q9Y697 457 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 TESPA1A2RU30 521 aaPredicted RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 SNAP29O95721 258 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 FOSL2P15408 326 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 POLR2CP19387 275 aaPredicted RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 TYK2P29597 1187 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 HADHAP40939 763 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 NR4A2P43354 598 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 EFR3AQ14156 821 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 IGSF11Q5DX21 431 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 MZT2BQ6NZ67 158 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 ERAP2Q6P179 960 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 DENND5BQ6ZUT9 1274 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 VASH1Q7L8A9 365 aaPredicted RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 TPH2Q8IWU9 490 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 RHOT1Q8IXI2 618 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PIK3C3Q8NEB9 887 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 CHPT1Q8WUD6 406 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 PPP1R36Q96LQ0 422 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 USE1Q9NZ43 259 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 ANKMY1Q9P2S6 941 aa10.66□□□□□ -0.7
PRDM1-201ENST00000369089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.66□□□□□ -0.7
PRDM1-201ENST00000369089 TMEM131LA2VDJ0 1609 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 DEPDC5O75140 1603 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 MUSKO15146 869 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 HLA-DRAP01903 254 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 M6PRP20645 277 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 GRIK1P39086 918 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 SLC26A3P40879 764 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 ADGRE1Q14246 886 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 DSC3Q14574 896 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 NFIL3Q16649 462 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 DCAF6Q58WW2 860 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 KIAA0408Q6ZU52 694 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TMEM26Q6ZUK4 368 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 ATG9AQ7Z3C6 839 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 LRRC17Q8N6Y2 441 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TNIP3Q96KP6 325 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 MND1Q9BWT6 205 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 CDH22Q9UJ99 828 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TPRKBQ9Y3C4 175 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 ZHX2Q9Y6X8 837 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 OVOS2A0A0G2JMS6 1433 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 PTGES3LE9PB15 166 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 PPEF1O14829 653 aaPredicted RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TBX1O43435 398 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 SGTAO43765 313 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TGDSO95455 350 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TFE3P19532 575 aaPredicted RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 YWHABP31946 246 aaKnown RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 BNIP2Q12982 314 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 GRAPQ13588 217 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 KYAT3Q6YP21 454 aaKnown RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 KCTD8Q6ZWB6 473 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 NATD1Q8N6N6 113 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 GRAPLQ8TC17 118 aaPredicted RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TCF12Q99081 682 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 KCTD14Q9BQ13 255 aaPredicted RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TDRD1Q9BXT4 1180 aaKnown RBP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 IFT22Q9H7X7 185 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms