RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 PLD6Q8N2A8 252 aaKnown RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 CCDC63Q8NA47 563 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 GRIN3AQ8TCU5 1115 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 TMEM40Q8WWA1 233 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 NKD1Q969G9 470 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 NR1H4Q96RI1 486 aaPredicted RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 PARD6BQ9BYG5 372 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 RAD21L1Q9H4I0 556 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 TUFT1Q9NNX1 390 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 POLR3BQ9NW08 1133 aaPredicted RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 UCKL1Q9NWZ5 548 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 KIF17Q9P2E2 1029 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 CACNG4Q9UBN1 327 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 ZNF70Q9UC06 446 aaPredicted RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 REXO2Q9Y3B8 237 aaKnown RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 PCDHGB2Q9Y5G2 931 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 SAR1BQ9Y6B6 198 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 SSU72P8A0A1W2PR75 194 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 HEATR9A2RTY3 570 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 H0YCG3 227 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 PPM1BO75688 479 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 CRTAPO75718 401 aaPredicted RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 ALOX5P09917 674 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 TPBGLP0DKB5 382 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 PRG2P13727 222 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 HNRNPLP14866 589 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 POLR2EP19388 210 aaKnown RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 CHMP24386 653 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 PTBP1P26599 531 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 ERVK-21P61565 698 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 HERVK_113P62684 666 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 ABATP80404 500 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 ARF5P84085 180 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 CCDC153Q494R4 210 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 CATSPER3Q86XQ3 398 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 ZC3H3Q8IXZ2 948 aaKnown RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 AGBL3Q8NEM8 1001 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 SLC9A6Q92581 669 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 INPP5DQ92835 1189 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 EEF2KMTQ96G04 330 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 ALS2CR12Q96Q35 445 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 SLC2A13Q96QE2 648 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 C9orf16Q9BUW7 83 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 PINK1Q9BXM7 581 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 SENP6Q9GZR1 1112 aaPredicted RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 AGPAT3Q9NRZ7 376 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 FAM207AQ9NSI2 230 aaPredicted RBP10.29□□□□□ -0.76
SCNM1-202ENST00000368905 FEM1BQ9UK73 627 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 TNFSF13BQ9Y275 285 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 PCDHB4Q9Y5E5 795 aa10.29□□□□□ -0.76
SCNM1-202ENST00000368905 YDJCA8MPS7 323 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TCP10L2B9ZVM9 353 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 ABCB7O75027 752 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 MED24O75448 989 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TMCC1O94876 653 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 LCA5LO95447 670 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 IVLP07476 585 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 POU2F1P14859 743 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 BPIP17213 487 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 COL9A1P20849 921 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 ALDH4A1P30038 563 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PPP5CP53041 499 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 CASP6P55212 293 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TAP2Q03519 686 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TRADDQ15628 312 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 AANATQ16613 207 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TSTQ16762 297 aaKnown RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 SLC9C1Q4G0N8 1177 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PAPD7Q5XG87 772 aaKnown RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PGBD2Q6P3X8 592 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 SLC22A25Q6T423 547 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 STXBP4Q6ZWJ1 553 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 ZNF765Q7L2R6 523 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TRAPPC11Q7Z392 1133 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 FRMD5Q7Z6J6 570 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PRPF39Q86UA1 669 aaKnown RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TMEM200AQ86VY9 491 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 CREB3L4Q8TEY5 395 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 NOX5Q96PH1 765 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 IFIH1Q9BYX4 1025 aaKnown RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 COPS7BQ9H9Q2 264 aaPredicted RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 MID1IP1Q9NPA3 183 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 ZNF446Q9NWS9 450 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 ERVK-19Q9WJR5 959 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 NAALAD2Q9Y3Q0 740 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PCDHA2Q9Y5H9 948 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 TRPV2Q9Y5S1 764 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 GOLGA8IPA6NC78 632 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 H7BY64 318 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PDXKO00764 312 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 MSH4O15457 936 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 PEX1O43933 1283 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 NR3C2P08235 984 aa10.28□□□□□ -0.76
SCNM1-202ENST00000368905 POU3F2P20265 443 aaPredicted RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 CFL1P23528 166 aaKnown RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 ARCN1P48444 511 aaKnown RBP10.28□□□□□ -0.76
SCNM1-202ENST00000368905 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms