RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 APOBEC2Q9Y235 224 aaKnown RBP10.78□□□□□ -0.68
CLRN3-201ENST00000368671 COQ4Q9Y3A0 265 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 NFE2L3Q9Y4A8 694 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 TMEM131Q92545 1883 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 LAMA1P25391 3075 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 ACACBO00763 2458 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 GOLGA6L7A0A1B0GV03 622 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 A0A1B0GVT2 93 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 FAM221BA6H8Z2 402 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 O00370 1275 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 TBL1XO60907 577 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 DNTTP04053 509 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 PABPC1P11940 636 aaKnown RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 TBXAS1P24557 533 aaPredicted RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 ACSL1P33121 698 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 ZNF445P59923 1031 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 FKBP3Q00688 224 aaKnown RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 RING1Q06587 406 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 CAMK2GQ13555 558 aaPredicted RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 HLA-BQ31612 363 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 MBLAC2Q68D91 279 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 RFWD3Q6PCD5 774 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 TMEM270Q6UE05 265 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 IL27RAQ6UWB1 636 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 ADIPOR2Q86V24 386 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 UBR7Q8N806 425 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 WFDC5Q8TCV5 224 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 ADAMTS14Q8WXS8 1223 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 KCTD13Q8WZ19 329 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 ERCC4Q92889 916 aaPredicted RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 TMEM245Q9H330 911 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 C6orf106Q9H6K1 298 aaPredicted RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 CNGB3Q9NQW8 809 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 STIM2Q9P246 746 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 ARMCX3Q9UH62 379 aaPredicted RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 STOML2Q9UJZ1 356 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 FNDC3AQ9Y2H6 1198 aaKnown RBP10.77□□□□□ -0.69
CLRN3-201ENST00000368671 PCDHB4Q9Y5E5 795 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 SLCO1B1Q9Y6L6 691 aa10.77□□□□□ -0.69
CLRN3-201ENST00000368671 TP53BP1Q12888 1972 aaPredicted RBP10.76□□□□□ -0.69
CLRN3-201ENST00000368671 M0QYV0 167 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 CBFA2T3O75081 653 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 LATS1O95835 1130 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 CALCAP01258 141 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 POLR2EP19388 210 aaKnown RBP10.76□□□□□ -0.69
CLRN3-201ENST00000368671 SLC6A4P31645 630 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 CD70P32970 193 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 CSNK1EP49674 416 aaKnown RBP10.76□□□□□ -0.69
CLRN3-201ENST00000368671 RPS14P62263 151 aaKnown RBP10.76□□□□□ -0.69
CLRN3-201ENST00000368671 SCAPQ12770 1279 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 PTPRNQ16849 979 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 ADGRF1Q5T601 910 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 ISM2Q6H9L7 571 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 LAYNQ6UX15 382 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 SLCO6A1Q86UG4 719 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 ZC3H3Q8IXZ2 948 aaKnown RBP10.76□□□□□ -0.69
CLRN3-201ENST00000368671 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLRN3-201ENST00000368671 CLEC4CQ8WTT0 213 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 TFAP2BQ92481 460 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 SMARCE1Q969G3 411 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 SLC35C1Q96A29 364 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 NT5C1BQ96P26 610 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 MIS12Q9H081 205 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 BTBD1Q9H0C5 482 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 PCED1AQ9H1Q7 454 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 PRSS16Q9NQE7 514 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 SNX11Q9Y5W9 270 aa10.76□□□□□ -0.69
CLRN3-201ENST00000368671 NYNRINQ9P2P1 1898 aaKnown RBP10.76□□□□□ -0.69
CLRN3-201ENST00000368671 PLXNA2O75051 1894 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 RNF225M0QZC1 329 aaPredicted RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 TAF4O00268 1085 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 KCNK3O14649 394 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 FLRT2O43155 660 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 ACSL4O60488 711 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 FSBPO95073 299 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 SMC2O95347 1197 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 SEMA4FO95754 770 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 LTFP02788 710 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 ATP5BP06576 529 aaKnown RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 DLDP09622 509 aaKnown RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 ZNF883P0CG24 379 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 BRD2P25440 801 aaKnown RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 SLC11A2P49281 568 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 FMO5P49326 533 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 AFF3P51826 1226 aaKnown RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 TBX4P57082 545 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 LRRC63Q05C16 580 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 TEAD4Q15561 434 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 TTC31Q49AM3 519 aaPredicted RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 CCDC40Q4G0X9 1142 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 PKDCCQ504Y2 493 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 COBLL1Q53SF7 1204 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 PIK3R6Q5UE93 754 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 MSANTD2Q6P1R3 559 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 LCLAT1Q6UWP7 414 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 KIAA0907Q7Z7F0 614 aaPredicted RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 GLRX5Q86SX6 157 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 PROSER1Q86XN7 944 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 MFN1Q8IWA4 741 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms