RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CCDC26Q8TAB7 109 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 KRT12Q99456 494 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 GAS2L1Q99501 681 aaPredicted RBP12.71□□□□□ -0.38
TUBE1-202ENST00000368662 SMPD4Q9NXE4 827 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.38
TUBE1-202ENST00000368662 STOML2Q9UJZ1 356 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 NR2E1Q9Y466 385 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 RAD54BQ9Y620 910 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 F5H5T6 163 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 MCF2LO15068 1137 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 DCLK1O15075 740 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 IRF1P10914 325 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 ERCC2P18074 760 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 NTHL1P78549 312 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 LMNB2Q03252 620 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 DHX34Q14147 1143 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 ADGRF1Q5T601 910 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 CES5AQ6NT32 575 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 RWDD4Q6NW29 188 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 C8orf74Q6P047 294 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 CCDC137Q6PK04 289 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 CHSY1Q86X52 802 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 DENND1CQ8IV53 801 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 KLHL7Q8IXQ5 586 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 LZTR1Q8N653 840 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 NOA1Q8NC60 698 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 GRK7Q8WTQ7 553 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 PRMT1Q99873 361 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 DDX47Q9H0S4 455 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 ADAM7Q9H2U9 754 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 PCYOX1Q9UHG3 505 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 SH3BP1Q9Y3L3 701 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 IGLV3-10A0A075B6K4 115 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 LINC01565O15544 149 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 ZNF189O75820 626 aaPredicted RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 TACR2P21452 398 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 AMPD1P23109 780 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 TERF1P54274 439 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 OTUD4Q01804 1114 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 BYSLQ13895 437 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 RABGAP1LQ5R372 815 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 TEX35Q5T0J7 233 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 RAP1GAP2Q684P5 730 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 NCBP2-AS2Q69YL0 99 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 HTR3DQ70Z44 454 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 ACTL9Q8TC94 416 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 C1orf54Q8WWF1 131 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 ZYG11BQ9C0D3 744 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 TDP1Q9NUW8 608 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 AGO1Q9UL18 857 aaKnown RBP12.7□□□□□ -0.38
TUBE1-202ENST00000368662 VANGL2Q9ULK5 521 aa12.7□□□□□ -0.38
TUBE1-202ENST00000368662 WASH4PA8MWX3 477 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 NCAM2O15394 837 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 LIASO43766 372 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 KLKB1P03952 638 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 TCF3P15923 654 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 CEBPBP17676 345 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 FSHRP23945 695 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 GGCXP38435 758 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 NOMO1Q15155 1222 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 C5orf22Q49AR2 442 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 TTC39BQ5VTQ0 682 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-202ENST00000368662 FBXL22Q6P050 247 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 Q6ZNB5 142 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 ATL2Q8NHH9 583 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 NKD2Q969F2 451 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-202ENST00000368662 HAUS1Q96CS2 278 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-202ENST00000368662 KIF9Q9HAQ2 790 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 NEU3Q9UQ49 428 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 DRG1Q9Y295 367 aaKnown RBP12.69□□□□□ -0.38
TUBE1-202ENST00000368662 R3HDM2Q9Y2K5 976 aaKnown RBP12.69□□□□□ -0.38
TUBE1-202ENST00000368662 HEY1Q9Y5J3 304 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 SNX10Q9Y5X0 201 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
TUBE1-202ENST00000368662 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 DRGXA6NNA5 263 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 LEFTY2O00292 366 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 NRG2O14511 850 aaPredicted RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 RHOQP17081 205 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 IGFBP4P22692 258 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 CHKAP35790 457 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 VCPP55072 806 aaKnown RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 XRCC4Q13426 336 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 COL19A1Q14993 1142 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 FAM133BQ5BKY9 247 aaKnown RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 NADSYN1Q6IA69 706 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ZNF683Q8IZ20 524 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 SLC35B2Q8TB61 432 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ATG4AQ8WYN0 398 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms