RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 NRP1O14786 923 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 ITM2AO43736 263 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 TOMM70O94826 608 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 F2P00734 622 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 PTPN1P18031 435 aaKnown RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 CCNG1P51959 295 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 PDE1BQ01064 536 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 DEUP1Q05D60 604 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 PDE1CQ14123 709 aaPredicted RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 CRYMQ14894 314 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 SV2CQ496J9 727 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 SMC1BQ8NDV3 1235 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 FBXO41Q8TF61 875 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 TIMM13Q9Y5L4 95 aaPredicted RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 MEIS3P2A8K0S8 358 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 STK10O94804 968 aaKnown RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 GSRP00390 522 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 NPR3P17342 541 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 PNPLA4P41247 253 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 CDC42EP1Q00587 391 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 MFSD10Q14728 455 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 ACSBG2Q5FVE4 666 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 KIAA0319Q5VV43 1072 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 SIX6OS1Q8N1H7 587 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 ATXN7L3BQ96GX2 97 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 HNRNPABQ99729 332 aaKnown RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 MKS1Q9NXB0 559 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 MBLAC1A4D2B0 266 aaPredicted RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 ALDH1A2O94788 518 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 AMHP03971 560 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 RARBP10826 455 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 NOS2P35228 1153 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 BEX3Q00994 111 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 TEX9Q8N6V9 391 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 ENDOVQ8N8Q3 282 aaKnown RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 SMG8Q8ND04 991 aaKnown RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 SLC7A14Q8TBB6 771 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 APBB2Q92870 758 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 NPY6RQ99463 290 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 ANLNQ9NQW6 1124 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 EMCNQ9ULC0 261 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 TKTL1P51854 596 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 TWF2Q6IBS0 349 aaKnown RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 DTX3LQ8TDB6 740 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 CDKL2Q92772 493 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 NAF1Q96HR8 494 aaKnown RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 DCLRE1BQ9H816 532 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 HBS1LQ9Y450 684 aaKnown RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 EEF2KO00418 725 aaKnown RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 CAPN9O14815 690 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 OPHN1O60890 802 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 SNNO75324 88 aaPredicted RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 KRT36O76013 467 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 KCNE1P15382 129 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 IFRD2Q12894 506 aaPredicted RBP18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 PDK1Q15118 436 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 STEAP4Q687X5 459 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 CLEC20AQ6ZU45 233 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 OR52K1Q8NGK4 314 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 KCNK16Q96T55 309 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 RPS6KL1Q9Y6S9 549 aa18.6■□□□□ 0.57
UBQLN4-201ENST00000368309 XPOTO43592 962 aaKnown RBP18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 PGM1P36871 562 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 AFF1P51825 1210 aaKnown RBP18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 NIPAL4Q0D2K0 466 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 OLFML2BQ68BL8 750 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 TIFABQ6ZNK6 161 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 DAB1O75553 588 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 MLNP12872 115 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 RCN1Q15293 331 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 WWP1Q9H0M0 922 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 THAP1Q9NVV9 213 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 ZNF358Q9NW07 568 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 ZFATQ9P243 1243 aa18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 KLHL8Q9P2G9 620 aaPredicted RBP18.59■□□□□ 0.57
UBQLN4-201ENST00000368309 CAPN14A8MX76 684 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 I6L893 689 aaPredicted RBP18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 ITGA2BP08514 1039 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 PGAM1P18669 254 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 UBAP2LQ14157 1087 aaKnown RBP18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 CCDC6Q16204 474 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 TLK2Q86UE8 772 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 HACE1Q8IYU2 909 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 MAB21L3Q8N8X9 362 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 WNT8BQ93098 351 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 PTPN18Q99952 460 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 ULBP1Q9BZM6 244 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 STAP1Q9ULZ2 295 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 PLXNB2O15031 1838 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 YJEFN3A6XGL0 299 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 E7ENQ6 273 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 PTGESO14684 152 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 BIRC5O15392 142 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 FYNP06241 537 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 MYL3P08590 195 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 LIMS2Q7Z4I7 341 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms