RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 RBM22Q9NW64 420 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 RUVBL2Q9Y230 463 aaKnown RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 ACOT9Q9Y305 439 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 NRXN3Q9Y4C0 1643 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 SLC12A8A0AV02 714 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 KCNK1O00180 336 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 CCNE2O96020 404 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 CPA3P15088 417 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 CDH3P22223 829 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 ATP13A4Q4VNC1 1196 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 TTMPQ5BVD1 217 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 TRPM4Q8TD43 1214 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 KLRG1Q96E93 195 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 FICDQ9BVA6 458 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 SAE1Q9UBE0 346 aaPredicted RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 DNAJC16Q9Y2G8 782 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 YDJCA8MPS7 323 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 XRCC4Q13426 336 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 ZNF280DQ6N043 979 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 MAB21L3Q8N8X9 362 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 TINF2Q9BSI4 451 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 NOL6Q9H6R4 1146 aaKnown RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 LRRC19Q9H756 370 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 DRG1Q9Y295 367 aaKnown RBP13.58□□□□□ -0.24
PTPRK-204ENST00000368210 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.24
PTPRK-204ENST00000368210 MANSC4A6NHS7 340 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 C2orf81A6NN90 581 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 SRP72O76094 671 aaKnown RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 CLK2P49760 499 aaKnown RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 WLSQ5T9L3 541 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 IYDQ6PHW0 289 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 HSD3B7Q9H2F3 369 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 GPBP1L1Q9HC44 474 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 SOAT2O75908 522 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 CCDC130P13994 396 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 RBL1P28749 1068 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 SCNN1BP51168 640 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 ITGA9Q13797 1035 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 DPYSL3Q14195 570 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 EFL1Q7Z2Z2 1120 aaKnown RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 ALG3Q92685 438 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 CCDC126Q96EE4 140 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 SMARCD1Q96GM5 515 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 VPS50Q96JG6 964 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 TIMMDC1Q9NPL8 285 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 TCHHQ07283 1943 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 HOXA2O43364 376 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 AKAP10O43572 662 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 NOL4O94818 638 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 KRT6AP02538 564 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 KRT6BP04259 564 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 KRT6CP48668 564 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 FSCN1Q16658 493 aaKnown RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 C15orf59Q2T9L4 293 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 LAYNQ6UX15 382 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 DDX53Q86TM3 631 aaKnown RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 OR9Q1Q8NGQ5 310 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 RUBCNLQ9H714 662 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 RIC8BQ9NVN3 520 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 ADGRA2Q96PE1 1338 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 RNF103O00237 685 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 NUDT2P50583 147 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 PRCCQ92733 491 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 INPP5DQ92835 1189 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 FAM84AQ96KN4 292 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 TMEM120AQ9BXJ8 343 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 RIPK3Q9Y572 518 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
PTPRK-204ENST00000368210 NRCAMQ92823 1304 aa13.57□□□□□ -0.24
PTPRK-204ENST00000368210 MAGEB16A2A368 324 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 OPLAHO14841 1288 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
PTPRK-204ENST00000368210 GSNP06396 782 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 ALOX15P16050 662 aaPredicted RBP13.56□□□□□ -0.24
PTPRK-204ENST00000368210 GP5P40197 560 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 FCHO2Q0JRZ9 810 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 STX5Q13190 355 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 BFSP2Q13515 415 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 SYTL3Q4VX76 610 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 DUPD1Q68J44 220 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 GIPC3Q8TF64 312 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 ZCWPW1Q9H0M4 648 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 NT5MQ9NPB1 228 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 RNF19AQ9NV58 838 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 H2AFYO75367 372 aaKnown RBP13.56□□□□□ -0.24
PTPRK-204ENST00000368210 BCL10O95999 233 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 RPL7AP62424 266 aaKnown RBP13.56□□□□□ -0.24
PTPRK-204ENST00000368210 EEF1DP3Q658K8 133 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 ABHD15Q6UXT9 468 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 KREMEN1Q96MU8 473 aa13.56□□□□□ -0.24
PTPRK-204ENST00000368210 FOPNLQ96NB1 174 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms