RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 XPNPEP1Q9NQW7 623 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 LGALS13Q9UHV8 139 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 RNF112Q9ULX5 631 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 MYH8P13535 1937 aa11.96□□□□□ -0.5
COPA-202ENST00000368069 KIF13AQ9H1H9 1805 aa11.96□□□□□ -0.5
COPA-202ENST00000368069 PSMA4P25789 261 aaKnown RBP11.96□□□□□ -0.5
COPA-202ENST00000368069 FUT11Q495W5 492 aa11.96□□□□□ -0.5
COPA-202ENST00000368069 ZNF470Q6ECI4 717 aa11.96□□□□□ -0.5
COPA-202ENST00000368069 WNT8BQ93098 351 aa11.96□□□□□ -0.5
COPA-202ENST00000368069 COQ4Q9Y3A0 265 aa11.96□□□□□ -0.5
COPA-202ENST00000368069 NCF1BA6NI72 391 aaPredicted RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 NCF1CA8MVU1 366 aaPredicted RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 NR5A2O00482 541 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 USP17L7P0C7H9 530 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 NCF1P14598 390 aaPredicted RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 GOT1P17174 413 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 EFEMP1Q12805 493 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 NOMO1Q15155 1222 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 SGO1Q5FBB7 561 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 FNBP1LQ5T0N5 605 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 XYLT1Q86Y38 959 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 ZNF555Q8NEP9 628 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 PPP1R13LQ8WUF5 828 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 VPS50Q96JG6 964 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 LGMNQ99538 433 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 APOL5Q9BWW9 433 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 GPR63Q9BZJ6 419 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 BRD8Q9H0E9 1235 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 C12orf65Q9H3J6 166 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 PAPOLBQ9NRJ5 636 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 MYH6P13533 1939 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 PDHXO00330 501 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 IRF6O14896 467 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 STX7O15400 261 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 UNGP13051 313 aaPredicted RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 NOS2P35228 1153 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 HDAC4P56524 1084 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 RAD51Q06609 339 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 GJC2Q5T442 439 aaPredicted RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 RNASEH2BQ5TBB1 312 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 ANKRD22Q5VYY1 191 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 ZNF786Q8N393 782 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 FBXO32Q969P5 355 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 ZNF333Q96JL9 665 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 C17orf80Q9BSJ5 609 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 RUBCNLQ9H714 662 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 PCDH18Q9HCL0 1135 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 RRN3Q9NYV6 651 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 TRMT6Q9UJA5 497 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 MYO1DO94832 1006 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 PIGNO95427 931 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 ESRRBO95718 433 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 PPP1R26Q5T8A7 1209 aaPredicted RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 WLSQ5T9L3 541 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 TMC7Q7Z402 723 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 CERS2Q96G23 380 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 CDRT15Q96T59 188 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 LRMDAQ9H2I8 198 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 RNPEPQ9H4A4 650 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 TBC1D13Q9NVG8 400 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 VTI1BQ9UEU0 232 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 EFR3BQ9Y2G0 817 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 C2CD2Q9Y426 696 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 CLPTM1O96005 669 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 LTFP02788 710 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 CCR1P32246 355 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 ARL2P36404 184 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 HARS2P49590 506 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 RGS4P49798 205 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 UBAP2LQ14157 1087 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 PSTKQ8IV42 348 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 NETO2Q8NC67 525 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 SMARCD1Q96GM5 515 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 TKTL2Q9H0I9 626 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
COPA-202ENST00000368069 ARL8BQ9NVJ2 186 aa11.95□□□□□ -0.5
COPA-202ENST00000368069 MYPNQ86TC9 1320 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 CELF2O95319 508 aaKnown RBP11.94□□□□□ -0.5
COPA-202ENST00000368069 HUNKP57058 714 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 CCDC15Q0P6D6 951 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 HSDL1Q3SXM5 330 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.94□□□□□ -0.5
COPA-202ENST00000368069 TFAP2DQ7Z6R9 452 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 PIGZQ86VD9 579 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 NMD3Q96D46 503 aaKnown RBP11.94□□□□□ -0.5
COPA-202ENST00000368069 CEP19Q96LK0 163 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 PRDM12Q9H4Q4 367 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 B4GALT4O60513 344 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 CLASP2O75122 1294 aaKnown RBP11.94□□□□□ -0.5
COPA-202ENST00000368069 POMCP01189 267 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 HNRNPCP07910 306 aaKnown RBP eCLIP11.94□□□□□ -0.59e-8■■□□□ 12.7
COPA-202ENST00000368069 PLIN5Q00G26 463 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 MFSD10Q14728 455 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 OASLQ15646 514 aaKnown RBP11.94□□□□□ -0.5
COPA-202ENST00000368069 ARCQ7LC44 396 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 PIGWQ7Z7B1 504 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 FAM13CQ8NE31 585 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 DDI1Q8WTU0 396 aa11.94□□□□□ -0.5
COPA-202ENST00000368069 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms