RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 DNAJC19Q96DA6 116 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 TNIP3Q96KP6 325 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 DCLK3Q9C098 648 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 KCNK4Q9NYG8 393 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 RASAL2Q9UJF2 1139 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 NAGPAQ9UK23 515 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 TDRD6O60522 2096 aaKnown RBP15.32■□□□□ 0.04
VAMP4-202ENST00000367740 PMS2P1A4D2B8 440 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 CDRT15L2A8MXV6 281 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 KIAA0391O15091 583 aaKnown RBP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 MID1O15344 667 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 DLDP09622 509 aaKnown RBP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 DLATP10515 647 aaKnown RBP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 CKMT1AP12532 417 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 GAP43P17677 238 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 RBMS1P29558 406 aaKnown RBP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 COG7P83436 770 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 SERINC3Q13530 473 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 ISXQ2M1V0 245 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 C4orf17Q53FE4 359 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 XKR5Q6UX68 686 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 TMC6Q7Z403 805 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 KIAA0907Q7Z7F0 614 aaPredicted RBP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 ZNF276Q8N554 614 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 MFSD2AQ8NA29 543 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 EXTL1Q92935 676 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 PRR11Q96HE9 360 aaPredicted RBP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 CCNL2Q96S94 520 aaPredicted RBP15.31■□□□□ 0.04
VAMP4-202ENST00000367740 CGRRF1Q99675 332 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 SDCBP2Q9H190 292 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 ABCB8Q9NUT2 735 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 HSPBP1Q9NZL4 362 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 FZD4Q9ULV1 537 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 PCDHA5Q9Y5H7 936 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 CREBBPQ92793 2442 aa15.31■□□□□ 0.04
VAMP4-202ENST00000367740 LATO43561 262 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 RNASEH2AO75792 299 aaKnown RBP15.3■□□□□ 0.04
VAMP4-202ENST00000367740 FAM87AP0C7U9 286 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 TNNI1P19237 187 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 PPP2CBP62714 309 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 PPP2CAP67775 309 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 EFEMP1Q12805 493 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 ALCAMQ13740 583 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 CST6Q15828 149 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 SGO2Q562F6 1265 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 MBLAC2Q68D91 279 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 NAPEPLDQ6IQ20 393 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 SCARA5Q6ZMJ2 495 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 CLEC20AQ6ZU45 233 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 TADA2BQ86TJ2 420 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 AHI1Q8N157 1196 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 MYO19Q96H55 970 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 FAM49BQ9NUQ9 324 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 HMGXB4Q9UGU5 601 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 SEPT3Q9UH03 358 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 MAN2B2Q9Y2E5 1009 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 PAXBP1Q9Y5B6 917 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 ITPR2Q14571 2701 aa15.3■□□□□ 0.04
VAMP4-202ENST00000367740 LY6G6EA0A0G2JKS1 128 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 SIN3BO75182 1162 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 GP1BAP07359 652 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 FAM200BP0CF97 657 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 GIMD1P0DJR0 217 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 PABPC1P11940 636 aaKnown RBP15.29■□□□□ 0.04
VAMP4-202ENST00000367740 PSEN1P49768 467 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 ADPRHP54922 357 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 CLEC14AQ86T13 490 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 IQCHQ86VS3 1027 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 C12orf29Q8N999 325 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 ZNF516Q92618 1163 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 ATXN7L3BQ96GX2 97 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 PSMG3-AS1Q96PY0 264 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 ARHGAP9Q9BRR9 750 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 UCKL1Q9NWZ5 548 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 SUN2Q9UH99 717 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 ATXN7L1Q9ULK2 861 aaPredicted RBP15.29■□□□□ 0.04
VAMP4-202ENST00000367740 LIMCH1Q9UPQ0 1083 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 PCDHGA8Q9Y5G5 932 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 U3KQA8 63 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 NBASA2RRP1 2371 aa15.29■□□□□ 0.04
VAMP4-202ENST00000367740 SPTBN1Q01082 2364 aaKnown RBP15.28■□□□□ 0.04
VAMP4-202ENST00000367740 FFAR2O15552 330 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 ITGB2P05107 769 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 DGKAP23743 735 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 ADORA2BP29275 332 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 ATICP31939 592 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 TRPC3Q13507 836 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 SNRNP35Q16560 246 aaKnown RBP15.28■□□□□ 0.04
VAMP4-202ENST00000367740 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 CCDC186Q7Z3E2 898 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 AADATQ8N5Z0 425 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 WFDC5Q8TCV5 224 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 SYAP1Q96A49 352 aaPredicted RBP15.28■□□□□ 0.04
VAMP4-202ENST00000367740 ELMO3Q96BJ8 720 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 OMDQ99983 421 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 SEMA3CQ99985 751 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 OSBPL2Q9H1P3 480 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms