RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 COX4I1P13073 169 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TKTL1P51854 596 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 GALNT11Q8NCW6 608 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ATRNO75882 1429 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 H3BM21 787 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 RPN2P04844 631 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 UQCRC1P31930 480 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 IQSEC1Q6DN90 963 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 RPRD1AQ96P16 312 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 NODALQ96S42 347 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SPATA5L1Q9BVQ7 753 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 XPNPEP3Q9NQH7 507 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TMPRSS15P98073 1019 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 FOLH1Q04609 750 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PLEKHG6Q3KR16 790 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SPOPLQ6IQ16 392 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TYW1BQ6NUM6 668 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 LRRC8DQ7L1W4 858 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MTURNQ8N3F0 131 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TRPV1Q8NER1 839 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 FAM213AQ9BRX8 229 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ZSCAN32Q9NX65 697 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 GCC2Q8IWJ2 1684 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PRAMEF22A3QJZ6 481 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ENDOUP21128 410 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TGM2P21980 687 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 GABARAPL2P60520 117 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 FCRLBQ6BAA4 426 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 P3H2Q8IVL5 708 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CCDC185Q8N715 623 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PPP1R13LQ8WUF5 828 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TCEAL3Q969E4 200 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TAMM41Q96BW9 452 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MNTQ99583 582 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ARMT1Q9H993 441 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SAGE1Q9NXZ1 904 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 KPNA5O15131 536 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CHADO15335 359 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 YKT6O15498 198 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 NCK2O43639 380 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ATF3P18847 181 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MXI1P50539 228 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SEMA3AQ14563 771 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SCARA3Q6AZY7 606 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SLC4A11Q8NBS3 891 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ABCB9Q9NP78 766 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SLC38A7Q9NVC3 462 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 UPB1Q9UBR1 384 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MAU2Q9Y6X3 613 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 B4E1Z4 1266 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 BTN3A3O00478 584 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TKFCQ3LXA3 575 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 LDHAL6AQ6ZMR3 332 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CLVS1Q8IUQ0 354 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ZBTB8OSQ8IWT0 167 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 RNF113BQ8IZP6 322 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SSX3Q99909 188 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 POLG2Q9UHN1 485 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PCDHGA1Q9Y5H4 931 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CYP27B1O15528 508 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CYP7B1O75881 506 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 F9P00740 461 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 THNSL1Q8IYQ7 743 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SEC14L1Q92503 715 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CPNE1Q99829 537 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 IFT80Q9P2H3 777 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 C21orf59P57076 290 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MTF1Q14872 753 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CARTPTQ16568 116 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 C15orf59Q2T9L4 293 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 NDUFAF1Q9Y375 327 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ADCY10Q96PN6 1610 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PNMA6EA0A0J9YXQ4 647 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PRR23D1E9PI22 279 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 S100A8P05109 93 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PRR23D2P0DMB1 279 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CENPAP49450 140 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ITGA7Q13683 1181 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TMC8Q8IU68 726 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 APOL5Q9BWW9 433 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PAIP1Q9H074 479 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 OLA1Q9NTK5 396 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 UNC119BA6NIH7 251 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 IMPDH1P20839 514 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ZC3H12BQ5HYM0 836 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 RRAGAQ7L523 313 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 FUNDC1Q8IVP5 155 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ZC3H7AQ8IWR0 971 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MCUQ8NE86 351 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 DCAF4Q8WV16 495 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TNFRSF21O75509 655 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 GLAP06280 429 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 MYBL2P10244 700 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 CDH3P22223 829 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 CCT3P49368 545 aaKnown RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 SLC35F1Q5T1Q4 408 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 IP6K1Q92551 441 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 ULK4Q96C45 1275 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 FOPNLQ96NB1 174 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms