RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ZNF473Q8WTR7 871 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RNF139Q8WU17 664 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 NDRG1Q92597 394 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 PGAP3Q96FM1 320 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RABEP2Q9H5N1 569 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 ETNK2Q9NVF9 386 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 NKIRAS1Q9NYS0 192 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 PSMC3IPQ9P2W1 217 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 TBK1Q9UHD2 729 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 PRDM4Q9UKN5 801 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 COL4A4P53420 1690 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 FNDC1Q4ZHG4 1894 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 MYO7AQ13402 2215 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 YJEFN3A6XGL0 299 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 TBKBP1A7MCY6 615 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RASA4BC9J798 803 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 E7ENQ6 273 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RASA4O43374 803 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 GCATO75600 419 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 TMEM63AO94886 807 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RB1P06400 928 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 BRAFP15056 766 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 IGFBP6P24592 240 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 SEC24CP53992 1094 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 GEMIN4P57678 1058 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 FAM189BP81408 668 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 GBE1Q04446 702 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 FASTKD3Q14CZ7 662 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 PDK1Q15118 436 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 HP1BP3Q5SSJ5 553 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 FNBP1LQ5T0N5 605 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 SPOUT1Q5T280 376 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 NCBP2-AS2Q69YL0 99 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 KCNT2Q6UVM3 1135 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 CAPN12Q6ZSI9 719 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 BNIPLQ7Z465 357 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 HASPINQ8TF76 798 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 CHMP6Q96FZ7 201 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 KCNK16Q96T55 309 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RC3H2Q9HBD1 1191 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 DDIT4Q9NX09 232 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 TMEM161AQ9NX61 479 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RAD54BQ9Y620 910 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 MRPL42Q9Y6G3 142 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 IKBKGQ9Y6K9 419 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 C5orf60A6NFR6 353 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 NRP1O14786 923 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 CREB3O43889 395 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 KRT15P19012 456 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 AMPD1P23109 780 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 BDNFP23560 247 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 SCAPQ12770 1279 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 NOMO2Q5JPE7 1267 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 SYPL2Q5VXT5 272 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 C3orf62Q6ZUJ4 267 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 SRRM1Q8IYB3 904 aaKnown RBP11.22□□□□□ -0.61
H3F3A-202ENST00000366814 ABI1Q8IZP0 508 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 ZMIZ2Q8NF64 920 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 HTR3CQ8WXA8 447 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 CLP1Q92989 425 aaKnown RBP11.22□□□□□ -0.61
H3F3A-202ENST00000366814 LRRC39Q96DD0 335 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 ELAC1Q9H777 363 aaKnown RBP11.22□□□□□ -0.61
H3F3A-202ENST00000366814 ARHGEF4Q9NR80 690 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 PIGVQ9NUD9 493 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 TMEM51Q9NW97 253 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.22□□□□□ -0.61
H3F3A-202ENST00000366814 DTLQ9NZJ0 730 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 THEGQ9P2T0 379 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 CTNNAL1Q9UBT7 734 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 USP3Q9Y6I4 520 aa11.22□□□□□ -0.61
H3F3A-202ENST00000366814 HHLA1C9JL84 531 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 TMEM189-UBE2V1I3L0A0 370 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 DLL1O00548 723 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 NCAM2O15394 837 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 KIAA0754O94854 1291 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 MAP3K6O95382 1288 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 TPSB2P20231 275 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 ADRA1BP35368 520 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 FDFT1P37268 417 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 MAGEA6P43360 314 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 TPI1P60174 286 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 TPSAB1Q15661 275 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 GKAP1Q5VSY0 366 aaPredicted RBP11.21□□□□□ -0.61
H3F3A-202ENST00000366814 OTUD1Q5VV17 481 aaPredicted RBP11.21□□□□□ -0.61
H3F3A-202ENST00000366814 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 RFX8Q6ZV50 586 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 HFE2Q6ZVN8 426 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 GPRIN1Q7Z2K8 1008 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 TAX1BP1Q86VP1 789 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 DCP1BQ8IZD4 617 aaKnown RBP11.21□□□□□ -0.61
H3F3A-202ENST00000366814 PYROXD2Q8N2H3 581 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 MCUQ8NE86 351 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 MRPL38Q96DV4 380 aaKnown RBP11.21□□□□□ -0.61
H3F3A-202ENST00000366814 SMC6Q96SB8 1091 aa11.21□□□□□ -0.61
H3F3A-202ENST00000366814 CYTH2Q99418 400 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms