RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TRPC5OSA6NMA1 111 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 NCF1CA8MVU1 366 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 TSPAN3O60637 253 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 CYP1A1P04798 512 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 NCF1P14598 390 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 VCLP18206 1134 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 CCNFP41002 786 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 TMED10P49755 219 aaKnown RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 ADIGQ0VDE8 80 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 ZBTB17Q13105 803 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 RBBP7Q16576 425 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 DNAJC1Q96KC8 554 aaKnown RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 HES2Q9Y543 173 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 CNTNAP2Q9UHC6 1331 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 C15orf38-AP3S2A0A0A6YYH1 394 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 UBDO15205 165 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 DYNC1LI2O43237 492 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 TOP3BO95985 862 aaKnown RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 MYL3P08590 195 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 F7P08709 466 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 RGS2P41220 211 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 ARPINQ7Z6K5 226 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 RMND5BQ96G75 393 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 NR1H4Q96RI1 486 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 BEGAINQ9BUH8 593 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 MAGEB5Q9BZ81 275 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 AP5M1Q9H0R1 490 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 EPB41L4BQ9H329 900 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 CYLDQ9NQC7 956 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 SLC17A6Q9P2U8 582 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 AP4B1Q9Y6B7 739 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 E5RI56 91 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 ACKR2O00590 384 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 CTSHP09668 335 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 CCDC130P13994 396 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 INSRRP14616 1297 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 AKAP5P24588 427 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 YWHAZP63104 245 aaKnown RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 TBCELQ5QJ74 424 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 TUBGCP5Q96RT8 1024 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 ZBTB18Q99592 522 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 PRDM12Q9H4Q4 367 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 S100A14Q9HCY8 104 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 SNTG2Q9NY99 539 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 MAP3K20Q9NYL2 800 aaKnown RBP14.23□□□□□ -0.13
COL6A1-201ENST00000361866 DDHD2O94830 711 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 GOT1P17174 413 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 HSPA13P48723 471 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 RTP1P59025 263 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 GPX6P59796 221 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 CDC16Q13042 620 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 PRKAA1Q13131 559 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 SHCBP1Q8NEM2 672 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 EGFL8Q99944 293 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 COQ4Q9Y3A0 265 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 BAIAP3O94812 1187 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 ALBP02768 609 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 ACADSBP45954 432 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 RPL5P46777 297 aaKnown RBP14.22□□□□□ -0.13
COL6A1-201ENST00000361866 MAP3K7CLP57077 242 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 DAB2P98082 770 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 SLC6A3Q01959 620 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 CCDC92Q53HC0 331 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-201ENST00000361866 B3GNT6Q6ZMB0 384 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 TDRPQ86YL5 185 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 SLC2A14Q8TDB8 520 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 ULK4Q96C45 1275 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 LRRC39Q96DD0 335 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 TBCBQ99426 244 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 GPAMQ9HCL2 828 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 XPNPEP1Q9NQW7 623 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 PPM1HQ9ULR3 514 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 PAPSS1O43252 624 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-201ENST00000361866 MGEA5O60502 916 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 PGAM1P18669 254 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 UBA1P22314 1058 aaKnown RBP14.22□□□□□ -0.13
COL6A1-201ENST00000361866 TSHZ1Q6ZSZ6 1077 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 UNC5BQ8IZJ1 945 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 DDHD1Q8NEL9 900 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 COPS5Q92905 334 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 CD101Q93033 1021 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 CYP3A43Q9HB55 503 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 FAM8A1Q9UBU6 413 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 PRKAG3Q9UGI9 489 aa14.22□□□□□ -0.13
COL6A1-201ENST00000361866 HEATR9A2RTY3 570 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 SUPT3HB4E1H0 165 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 INPP4BO15327 924 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 SIN3BO75182 1162 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 TMCC1O94876 653 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 UQCRBP14927 111 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 PSMA4P25789 261 aaKnown RBP14.21□□□□□ -0.13
COL6A1-201ENST00000361866 AQP4P55087 323 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 WASHC5Q12768 1159 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 LBRQ14739 615 aaKnown RBP14.21□□□□□ -0.13
COL6A1-201ENST00000361866 IMPG1Q17R60 797 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 METTL7BQ6UX53 244 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 SIAH1Q8IUQ4 282 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 FAM156AQ8NDB6 213 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 AFG1LQ8WV93 481 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 CERS2Q96G23 380 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms