RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 BEND5Q7L4P6 421 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 BNIPLQ7Z465 357 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ZCCHC9Q8N567 271 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 KLHL23Q8NBE8 558 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ADAM32Q8TC27 787 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 RAD9AQ99638 391 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ABCC13Q9NSE7 274 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 GPATCH2LQ9NWQ4 482 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 SYNJ2BP-COX16A0A087WUM0 186 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 TLL1O43897 1013 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ENDOD1O94919 500 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 SEC24AO95486 1093 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ATP6V1G2O95670 118 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 HAPLN1P10915 354 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ATF6P18850 670 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 MAGEA4P43358 317 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 YWHAGP61981 247 aaKnown RBP eCLIP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 NME3Q13232 169 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 CA9Q16790 459 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 DRICH1Q6PGQ1 229 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 DENND5BQ6ZUT9 1274 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 SCD5Q86SK9 330 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 PHOSPHO2Q8TCD6 241 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 TGS1Q96RS0 853 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 SNRNP25Q9BV90 132 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 NMUR1Q9HB89 426 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 ABCF3Q9NUQ8 709 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 DNAJC17Q9NVM6 304 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 COX16Q9P0S2 106 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 KLHL14Q9P2G3 628 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 BAIAP2L1Q9UHR4 511 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 MYO7AQ13402 2215 aa13.58□□□□□ -0.23
SQSTM1-201ENST00000360718 UBOX5O94941 541 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 TUFMP49411 452 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 SF3A3Q12874 501 aaKnown RBP eCLIP13.58□□□□□ -0.248e-7■■■□□ 15.8
SQSTM1-201ENST00000360718 GALNTL6Q49A17 601 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 ZC3H12AQ5D1E8 599 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 TBC1D1Q86TI0 1168 aaPredicted RBP13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 RFX6Q8HWS3 928 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 TTC13Q8NBP0 860 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 RBM15Q96T37 977 aaKnown RBP eCLIP13.58□□□□□ -0.248e-7■■■□□ 14.8
SQSTM1-201ENST00000360718 PPCSQ9HAB8 311 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 TMPRSS4Q9NRS4 437 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 MRPL17Q9NRX2 175 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 OSER1Q9NX31 292 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 CTNNAL1Q9UBT7 734 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 AP4E1Q9UPM8 1137 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 SCML2Q9UQR0 700 aa13.58□□□□□ -0.24
SQSTM1-201ENST00000360718 LILRB3O75022 631 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 NQO1P15559 274 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 CREB1P16220 341 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 KLRC2P26717 231 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 BNIP1Q12981 228 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 TFDP2Q14188 446 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 TAZQ16635 292 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 P3H1Q32P28 736 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 TPGS2Q68CL5 300 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 MON1AQ86VX9 555 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 FAM131BQ86XD5 332 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 VSIG1Q86XK7 387 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 PSTKQ8IV42 348 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 SRRM1Q8IYB3 904 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 CCDC185Q8N715 623 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 GDAP1Q8TB36 358 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 DHX35Q9H5Z1 703 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ECT2Q9H8V3 914 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 RXFP1Q9HBX9 757 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 COMMD8Q9NX08 183 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 DDIT4Q9NX09 232 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 TBK1Q9UHD2 729 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ZNF148Q9UQR1 794 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 DRG1Q9Y295 367 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 SSX2IPQ9Y2D8 614 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 CCDC85CA6NKD9 419 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 RASA4BC9J798 803 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 I6L893 689 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 DNALI1O14645 258 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 RASA4O43374 803 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 CST8O60676 142 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ABLIM3O94929 683 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 YWHAQP27348 245 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ARSEP51690 589 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 AIF1P55008 147 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 CREMQ03060 361 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ARL13BQ3SXY8 428 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 PPP6R3Q5H9R7 873 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ZNF461Q8TAF7 563 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 GIPC2Q8TF65 315 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 RNF139Q8WU17 664 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 PGAP3Q96FM1 320 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 C9orf72Q96LT7 481 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 CEP295NLQ96MC4 621 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ALG13Q9NP73 1137 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 ANLNQ9NQW6 1124 aa13.57□□□□□ -0.24
SQSTM1-201ENST00000360718 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.57□□□□□ -0.243e-8■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms