RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 LMBRD2Q68DH5 695 aaPredicted RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PALB2Q86YC2 1186 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 POLD4Q9HCU8 107 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 GTF3C4Q9UKN8 822 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 TMCC2O75069 709 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 IL12AP29459 219 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 DENND5AQ6IQ26 1287 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 GLB1LQ6UWU2 654 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 SLFN11Q7Z7L1 901 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ATXN2LQ8WWM7 1075 aaKnown RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 TEX13BQ9BXU2 312 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ATP4AP20648 1035 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ADSSL1Q8N142 457 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 TCAIMQ8N3R3 496 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 FAM118BQ9BPY3 351 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ZCCHC2Q9C0B9 1178 aaKnown RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 SORCS3Q9UPU3 1222 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 TBX22Q9Y458 520 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ATP10AO60312 1499 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 F5H5T6 163 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PECAM1P16284 738 aaPredicted RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 NR1H2P55055 460 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 RIPK1Q13546 671 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 GRPEL2Q8TAA5 225 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 IRX2Q9BZI1 471 aaPredicted RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 EMC3Q9P0I2 261 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 RGS14O43566 566 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 RAD17O75943 681 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ASS1P00966 412 aaKnown RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 HMBSP08397 361 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 EPHB2P29323 1055 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ALDH3A2P51648 485 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 VBP1P61758 197 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 COPZ1P61923 177 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 NOTUMQ6P988 496 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF276Q8N554 614 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PSMA8Q8TAA3 256 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF232Q9UNY5 417 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PP2D1A8MPX8 630 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 SERPINA1P01009 418 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PRLRP16471 622 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 TAF5Q15542 800 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 NRF1Q16656 503 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 NET1Q7Z628 596 aaPredicted RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 REXO1L1PQ8IX06 675 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ACTRT1Q8TDG2 376 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 RAPGEFL1Q9UHV5 662 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 FAM25EA8MYX2 175 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PRODHO43272 600 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 MTM1Q13496 603 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 TMEM132BQ14DG7 1078 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 CKLFQ9UBR5 152 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 INVSQ9Y283 1065 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 CPA3P15088 417 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 HALP42357 657 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 RP9Q8TA86 221 aaKnown RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PRKD2Q9BZL6 878 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 L1RE1Q9UN81 338 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 CPDO75976 1380 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 HEG1Q9ULI3 1381 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 MSLNQ13421 630 aaPredicted RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 POLNQ7Z5Q5 900 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ABCB10Q9NRK6 738 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 RASSF1Q9NS23 344 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 IKZF3Q9UKT9 509 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 C2CD2Q9Y426 696 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF335Q9H4Z2 1342 aaPredicted RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 AP1S1P61966 158 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF655Q8N720 491 aaPredicted RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 CPNE1Q99829 537 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ZFYVE16Q7Z3T8 1539 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.48□□□□□ -0.89
VPS13A-203ENST00000360280 NUDT14O95848 222 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 ETS1P14921 441 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 ADSSP30520 456 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 GJA8P48165 433 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF177Q13360 481 aaPredicted RBP9.48□□□□□ -0.89
VPS13A-203ENST00000360280 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 TMCO1Q9UM00 188 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 ENTPD4Q9Y227 616 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 TCEA3O75764 348 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 ROR2Q01974 943 aaKnown RBP9.48□□□□□ -0.89
VPS13A-203ENST00000360280 RALGDSQ12967 914 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 GRTP1Q5TC63 336 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 CYP4F12Q9HCS2 524 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 C3orf18Q9UK00 162 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 PALLDQ8WX93 1383 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 HLA-DQA1Q5Y7H0 255 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 TC2NQ8N9U0 490 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 OXER1Q8TDS5 423 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 UMPSP11172 480 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 SRP68Q9UHB9 627 aaKnown RBP9.48□□□□□ -0.89
VPS13A-203ENST00000360280 OMPP47874 163 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.48□□□□□ -0.89
VPS13A-203ENST00000360280 TBC1D30Q9Y2I9 924 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 LSM8O95777 96 aaKnown RBP9.48□□□□□ -0.89
VPS13A-203ENST00000360280 RAP1GAPP47736 663 aa9.48□□□□□ -0.89
VPS13A-203ENST00000360280 FAM187BQ17R55 369 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms