RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RALBP11234 206 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 CALB2P22676 271 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 GJA5P36382 358 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 GP5P40197 560 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 PTPN9P43378 593 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 CRYBB1P53674 252 aaPredicted RBP11.48□□□□□ -0.57
SSU72-202ENST00000359060 MPP3Q13368 585 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 MMEL1Q495T6 779 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 NAPEPLDQ6IQ20 393 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 STRADAQ7RTN6 431 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 CTU1Q7Z7A3 348 aaKnown RBP11.48□□□□□ -0.57
SSU72-202ENST00000359060 CCNJLQ8IV13 435 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 SYBUQ9NX95 663 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 HACD1B0YJ81 288 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 FGFR1P11362 822 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 PGAM1P18669 254 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 GCKP35557 465 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 GABRB2P47870 512 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 PARP6Q2NL67 630 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 SYPL2Q5VXT5 272 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 CMC1Q7Z7K0 106 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 FGD4Q96M96 766 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 CXCL16Q9H2A7 254 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 ZFYVE28Q9HCC9 887 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 ARL8BQ9NVJ2 186 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 DCDC2Q9UHG0 476 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 PCDHA11Q9Y5I1 949 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 SNX10Q9Y5X0 201 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 CITO14578 2027 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 MTSS1O43312 755 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 MGRN1O60291 552 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 CPA3P15088 417 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 KCNJ11Q14654 390 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 OSBPL1AQ9BXW6 950 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 SP110Q9HB58 689 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 ANGPTL2Q9UKU9 493 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 TEX264Q9Y6I9 313 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 MYBPHLA2RUH7 354 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 CCDC160A6NGH7 325 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 GPR182O15218 404 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 LYPLA1O75608 230 aaPredicted RBP11.47□□□□□ -0.57
SSU72-202ENST00000359060 PAMP19021 973 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 ADRA1BP35368 520 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 BRCC3P46736 316 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 PITX1P78337 314 aaPredicted RBP11.47□□□□□ -0.57
SSU72-202ENST00000359060 HIC1Q14526 733 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 OVOS1Q6IE37 1185 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 RGS9BPQ6ZS82 235 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 MIB1Q86YT6 1006 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 STK32AQ8WU08 396 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 BTBD10Q9BSF8 475 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 CXorf56Q9H5V9 222 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 TP73O15350 636 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 F7P08709 466 aaPredicted RBP11.47□□□□□ -0.57
SSU72-202ENST00000359060 CPB1P15086 417 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 PREPLQ4J6C6 727 aaPredicted RBP11.47□□□□□ -0.57
SSU72-202ENST00000359060 FSCBQ5H9T9 825 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 ARHGAP17Q68EM7 881 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 TTC7BQ86TV6 843 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 FAM35AQ86V20 835 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 SMARCD1Q96GM5 515 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 SPON2Q9BUD6 331 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 ZNF395Q9H8N7 513 aaPredicted RBP11.47□□□□□ -0.57
SSU72-202ENST00000359060 VRTNQ9H8Y1 702 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 FAM105AQ9NUU6 356 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 C15orf41Q9Y2V0 281 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 PLLPQ9Y342 182 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 AKR1A1P14550 325 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 CNTFP26441 200 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 ETFBP38117 255 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 SLC1A6P48664 564 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 PRAMEP78395 509 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 ART3Q13508 389 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 DPYSL2Q16555 572 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 HFE2Q6ZVN8 426 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 TNS4Q8IZW8 715 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 VPS39Q96JC1 886 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 ELMO2Q96JJ3 720 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 NMUR2Q9GZQ4 415 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 USP29Q9HBJ7 922 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 THAP1Q9NVV9 213 aa11.47□□□□□ -0.57
SSU72-202ENST00000359060 IPO11Q9UI26 975 aaKnown RBP11.47□□□□□ -0.57
SSU72-202ENST00000359060 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.47□□□□□ -0.57
SSU72-202ENST00000359060 A0A096LPK6 155 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 TCRBV5S1A1TA0A578 114 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 YJEFN3A6XGL0 299 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 MEI4A8MW99 385 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 E7ENQ6 273 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 E9PBE3 544 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 SPTLC1O15269 473 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 TYROBPO43914 113 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 KLHL41O60662 606 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 TOP3BO95985 862 aaKnown RBP11.46□□□□□ -0.57
SSU72-202ENST00000359060 NFKB1P19838 968 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 HOXA11P31270 313 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms