RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 KIAA1841Q6NSI8 718 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 DDIASQ8IXT1 998 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ZNF670Q9BS34 389 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
COL20A1-201ENST00000358894 COL16A1Q07092 1604 aaPredicted RBP12.57□□□□□ -0.4
COL20A1-201ENST00000358894 PFDN6O15212 129 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 CNGA3Q16281 694 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 MSS51Q4VC12 460 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 DRICH1Q6PGQ1 229 aaPredicted RBP12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ADGRD1Q6QNK2 874 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 IZUMO2Q6UXV1 221 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 UNC5AQ6ZN44 842 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 NT5DC4Q86YG4 428 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 DEFB107AQ8IZN7 70 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 GALNT4Q8N4A0 578 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 KATNAL1Q9BW62 490 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 NMUR2Q9GZQ4 415 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 NENFQ9UMX5 172 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ARHGAP26Q9UNA1 814 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 RUVBL2Q9Y230 463 aaKnown RBP12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ECM29Q5VYK3 1845 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 GRIN3BO60391 1043 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 LYPLA1O75608 230 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 POMCP01189 267 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 SERPINE1P05121 402 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 THP07101 528 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 CPB1P15086 417 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 CNTFP26441 200 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 PTDSS1P48651 473 aaKnown RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 TCHHL1Q5QJ38 904 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 CWF19L1Q69YN2 538 aaKnown RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 PDPK2PQ6A1A2 396 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 ZNF410Q86VK4 478 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 RNF148Q8N7C7 305 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 GTF3C2Q8WUA4 911 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 GAD1Q99259 594 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 XPNPEP3Q9NQH7 507 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 SLC12A4Q9UP95 1085 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 GRK2P25098 689 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 KLF1Q13351 362 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 ZNF235Q14590 738 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 CA9Q16790 459 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 ANKRD52Q8NB46 1076 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 FZD8Q9H461 694 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 PACSIN3Q9UKS6 424 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 LRFN2Q9ULH4 789 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 LAMB1P07942 1786 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 ARHGAP10A1A4S6 786 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 PHGDHO43175 533 aaKnown RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 TIMM44O43615 452 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 GFAPP14136 432 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 PGAM1P18669 254 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 GPD2P43304 727 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 TCEAL1Q15170 157 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 OASLQ15646 514 aaKnown RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 LRRC8EQ6NSJ5 796 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 CMC1Q7Z7K0 106 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 TNS4Q8IZW8 715 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 RMDN1Q96DB5 314 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 SERAC1Q96JX3 654 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 SIKE1Q9BRV8 207 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 EPB41L4BQ9H329 900 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 SOX13Q9UN79 622 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 CDYLQ9Y232 598 aa12.56□□□□□ -0.4
COL20A1-201ENST00000358894 COL22A1Q8NFW1 1626 aaPredicted RBP12.56□□□□□ -0.4
COL20A1-201ENST00000358894 C2CD4BA6NLJ0 364 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 ZMPSTE24O75844 475 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 PROCP04070 461 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 ACADSP16219 412 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 CPT1AP50416 773 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 KCTD21Q4G0X4 260 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 RARS2Q5T160 578 aaKnown RBP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 EMC10Q5UCC4 262 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 TLK2Q86UE8 772 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 PYROXD2Q8N2H3 581 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 PIWIL2Q8TC59 973 aaKnown RBP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 APBA2Q99767 749 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 MAGEB5Q9BZ81 275 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 TXLNGYQ9BZA5 131 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 HAPLN2Q9GZV7 340 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 MMADHCQ9H3L0 296 aaPredicted RBP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 XPO1O14980 1071 aaKnown RBP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 SKIV2L2P42285 1042 aaKnown RBP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 SLC34A1Q06495 639 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 UBAP2LQ14157 1087 aaKnown RBP12.55□□□□□ -0.4
COL20A1-201ENST00000358894 EML3Q32P44 896 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 RHBDF2Q6PJF5 856 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 UNC93AQ86WB7 457 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 ADAM7Q9H2U9 754 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 DPEP3Q9H4B8 488 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 KCNK4Q9NYG8 393 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 ANGPTL3Q9Y5C1 460 aa12.55□□□□□ -0.4
COL20A1-201ENST00000358894 PSMD7P51665 324 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms