RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 PPARDQ03181 441 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 PPIGQ13427 754 aaKnown RBP eCLIP12.34□□□□□ -0.431e-7■■■■□ 22.6
SYN3-202ENST00000358763 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 PDK1Q15118 436 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 MSS51Q4VC12 460 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 BZW1Q7L1Q6 419 aaKnown RBP12.34□□□□□ -0.43
SYN3-202ENST00000358763 C14orf80Q86SX3 495 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 DDX53Q86TM3 631 aaKnown RBP12.34□□□□□ -0.43
SYN3-202ENST00000358763 ZBED8Q8IZ13 594 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 EPS8L3Q8TE67 593 aaKnown RBP12.34□□□□□ -0.43
SYN3-202ENST00000358763 P2RY11Q96G91 374 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 CLIC5Q9NZA1 410 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 MARCH2Q9P0N8 246 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 TLR6Q9Y2C9 796 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 YIPF1Q9Y548 306 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 HS3ST4Q9Y661 456 aa12.34□□□□□ -0.43
SYN3-202ENST00000358763 KCNK1O00180 336 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 TLR5O60602 858 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 TUFMP49411 452 aaKnown RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 KCNJ11Q14654 390 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 PRKD1Q15139 912 aaPredicted RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 SLC39A13Q96H72 371 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 ZNF512Q96ME7 567 aaPredicted RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 HAPLN3Q96S86 360 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 ETNK1Q9HBU6 452 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 SLC12A8A0AV02 714 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 KCNU1A8MYU2 1149 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 HACD1B0YJ81 288 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 RNF103O00237 685 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 PRRG1O14668 218 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 PPP1R12AO14974 1030 aaPredicted RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 FGF18O76093 207 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 ABLIM3O94929 683 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 SPATA31D3P0C874 917 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 PIK3R6Q5UE93 754 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 ARHGEF18Q6ZSZ5 1173 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 SPATA31D4Q6ZUB0 917 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 CENPUQ71F23 418 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 HOOK3Q86VS8 718 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 FIBCD1Q8N539 461 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 ATP6V1G3Q96LB4 118 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 FOXP3Q9BZS1 431 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 PRDM16Q9HAZ2 1276 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 MPP6Q9NZW5 540 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 MYO18AQ92614 2054 aaKnown RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 APRTP07741 180 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 PSEN1P49768 467 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 EIF3BP55884 814 aaKnown RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 PLD1Q13393 1074 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 BBS9Q3SYG4 887 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 TTLL2Q9BWV7 592 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 KLC2Q9H0B6 622 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
SYN3-202ENST00000358763 ADAM21Q9UKJ8 722 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 VANGL2Q9ULK5 521 aa12.33□□□□□ -0.44
SYN3-202ENST00000358763 E9PAM4 449 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 NDC80O14777 642 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 GCATO75600 419 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 APOEP02649 317 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 PPM1AP35813 382 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 ARL4CP56559 192 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 LONRF1Q17RB8 773 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 ANKRD20A2Q5SQ80 823 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 TMEM240Q5SV17 173 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 ANKRD20A1Q5TYW2 823 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 MANEALQ5VSG8 457 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 ANKRD20A3Q5VUR7 823 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 PDZD4Q76G19 769 aaPredicted RBP12.32□□□□□ -0.44
SYN3-202ENST00000358763 TBC1D31Q96DN5 1066 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
SYN3-202ENST00000358763 NDFIP2Q9NV92 336 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 ZMYND8Q9ULU4 1186 aaPredicted RBP12.32□□□□□ -0.44
SYN3-202ENST00000358763 SHROOM3Q8TF72 1996 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 A0A0A0MRY4 1105 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 LCHNA4D1U4 455 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 C5orf60A6NFR6 353 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 TEX28O15482 410 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 AVILO75366 819 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 ZDHHC11BP0C7U3 371 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 LINC00271P0C7V0 271 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 HMGA1P17096 107 aaKnown RBP12.32□□□□□ -0.44
SYN3-202ENST00000358763 SERPINB6P35237 376 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 ALDH1A3P47895 512 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 TUBP50607 506 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 IRAK1P51617 712 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
SYN3-202ENST00000358763 TAF12Q16514 161 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 SPATA13Q96N96 652 aa12.32□□□□□ -0.44
SYN3-202ENST00000358763 WDR83Q9BRX9 315 aaKnown RBP12.32□□□□□ -0.44
SYN3-202ENST00000358763 DFFAO00273 331 aa12.31□□□□□ -0.44
SYN3-202ENST00000358763 CHADO15335 359 aa12.31□□□□□ -0.44
SYN3-202ENST00000358763 ZNF135P52742 658 aaPredicted RBP12.31□□□□□ -0.44
SYN3-202ENST00000358763 HTRA4P83105 476 aaPredicted RBP12.31□□□□□ -0.44
SYN3-202ENST00000358763 WASHC5Q12768 1159 aa12.31□□□□□ -0.44
SYN3-202ENST00000358763 TWF1Q12792 350 aa12.31□□□□□ -0.44
SYN3-202ENST00000358763 RAB33AQ14088 237 aa12.31□□□□□ -0.44
SYN3-202ENST00000358763 ARTNQ5T4W7 220 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms