RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 WDR27A2RRH5 827 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 MEI4A8MW99 385 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 FZD9O00144 591 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 PAPSS1O43252 624 aaPredicted RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 ZCCHC18P0CG32 403 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 RALBP11234 206 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 GP5P40197 560 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 MAGEA12P43365 314 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 INHBEP58166 350 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 CUL3Q13618 768 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 AMHR2Q16671 573 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 DEFB132Q7Z7B7 95 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 FBXW8Q8N3Y1 598 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 HAPLN3Q96S86 360 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 RTKNQ9BST9 563 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 EBF3Q9H4W6 596 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 DTLQ9NZJ0 730 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 TXNDC16Q9P2K2 825 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 PCDHB12Q9Y5F1 795 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 PPP2R3BQ9Y5P8 575 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 SMIM31A0A1B0GVY4 71 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 TMEM114B3SHH9 223 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 RNASEH1O60930 286 aaKnown RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 LYPLA1O75608 230 aaPredicted RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 PDCD2Q16342 344 aaPredicted RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 SPANXN3Q5MJ09 141 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 ARHGAP17Q68EM7 881 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 NCBP2-AS2Q69YL0 99 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 SLC25A41Q8N5S1 370 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 SLC26A7Q8TE54 656 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 DHX35Q9H5Z1 703 aaKnown RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 PPP1R1BQ9UD71 204 aaPredicted RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 PRPF19Q9UMS4 504 aaKnown RBP18.19■□□□□ 0.5
RTN4-204ENST00000357732 POMPQ9Y244 141 aa18.19■□□□□ 0.5
RTN4-204ENST00000357732 SLC22A2O15244 555 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 USP1O94782 785 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 POLBP06746 335 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 IQCF3P0C7M6 154 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 KCNA4P22459 653 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 RGS7P49802 495 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 MTTPP55157 894 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 CNPY1Q3B7I2 92 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 ZNF484Q5JVG2 852 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 PPP1R26Q5T8A7 1209 aaPredicted RBP18.18■□□□□ 0.5
RTN4-204ENST00000357732 C16orf46Q6P387 395 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 CASC4Q6P4E1 433 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 STRADAQ7RTN6 431 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 MAVSQ7Z434 540 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 KBTBD6Q86V97 674 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 UNC93AQ86WB7 457 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 TTC30AQ86WT1 665 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 C10orf107Q8IVU9 208 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 MTMR10Q9NXD2 777 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 C6orf203Q9P0P8 240 aaPredicted RBP18.18■□□□□ 0.5
RTN4-204ENST00000357732 DERAQ9Y315 318 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 KAT6AQ92794 2004 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 PIK3R2O00459 728 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 C22orf31O95567 290 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 RPL34P49207 117 aaKnown RBP18.18■□□□□ 0.5
RTN4-204ENST00000357732 GLUD2P49448 558 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 CLCN3P51790 818 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 DLK2Q6UY11 383 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 DENND5BQ6ZUT9 1274 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 PYDC1Q8WXC3 89 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 ARNTL2Q8WYA1 636 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 GORASP1Q9BQQ3 440 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 TRIM56Q9BRZ2 755 aaKnown RBP18.18■□□□□ 0.5
RTN4-204ENST00000357732 SPATC1LQ9H0A9 340 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 MID2Q9UJV3 735 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 USP3Q9Y6I4 520 aa18.18■□□□□ 0.5
RTN4-204ENST00000357732 MAP3K6O95382 1288 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 TOP3BO95985 862 aaKnown RBP18.17■□□□□ 0.5
RTN4-204ENST00000357732 PRKCGP05129 697 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 CPA3P15088 417 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 ITGAXP20702 1163 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 ARL4AP40617 200 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 GRIA1P42261 906 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 NUMBP49757 651 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 CFAP157Q5JU67 520 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 COLGALT1Q8NBJ5 622 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 GDPD5Q8WTR4 605 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 CLMNQ96JQ2 1002 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 SPATA33Q96N06 139 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 BCAP29Q9UHQ4 241 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 KPNA7A9QM74 516 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 ZBTB7AO95365 584 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 VCLP18206 1134 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 TYK2P29597 1187 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 SERPINB8P50452 374 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 RALGPS1Q5JS13 557 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 EPGNQ6UW88 154 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 SCUBE3Q8IX30 993 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 C12orf29Q8N999 325 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 SLC16A10Q8TF71 515 aa18.17■□□□□ 0.5
RTN4-204ENST00000357732 MPOP05164 745 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 PGK2P07205 417 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 ACADSBP45954 432 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 EPHB1P54762 984 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms