RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ZNF211Q13398 564 aaPredicted RBP26.24■■□□□ 1.79
SSBP3-202ENST00000357475 RPS6KA1Q15418 735 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 MANEALQ5VSG8 457 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 SYT10Q6XYQ8 523 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 MTSS1LQ765P7 747 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 CIR1Q86X95 450 aaPredicted RBP26.24■■□□□ 1.79
SSBP3-202ENST00000357475 PSTKQ8IV42 348 aaKnown RBP26.24■■□□□ 1.79
SSBP3-202ENST00000357475 KATNAL2Q8IYT4 538 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 ZDHHC14Q8IZN3 488 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 LGI2Q8N0V4 545 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 CFAP52Q8N1V2 620 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 KCTD6Q8NC69 237 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 OSCP1Q8WVF1 389 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 C1orf74Q96LT6 269 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 DUS2Q9NX74 493 aaKnown RBP26.24■■□□□ 1.79
SSBP3-202ENST00000357475 JRKLQ9Y4A0 524 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 LRRD1A4D1F6 860 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 MIF4GDA9UHW6 222 aaKnown RBP26.23■■□□□ 1.79
SSBP3-202ENST00000357475 E9PAM4 449 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 GOT1P17174 413 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 KDELR1P24390 212 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 IL4RP24394 825 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 ETF1P62495 437 aaKnown RBP26.23■■□□□ 1.79
SSBP3-202ENST00000357475 TNK2Q07912 1038 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 FCHO2Q0JRZ9 810 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 DPYSL3Q14195 570 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 FAM71BQ8TC56 605 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 TSC1Q92574 1164 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 BHMTQ93088 406 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 CWC15Q9P013 229 aaKnown RBP26.23■■□□□ 1.79
SSBP3-202ENST00000357475 DNAI1Q9UI46 699 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 FAM50BQ9Y247 325 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 ZNF510Q9Y2H8 683 aa26.23■■□□□ 1.79
SSBP3-202ENST00000357475 LOC730098B7Z3J9 87 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 PYGMP11217 842 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 PSMC3P17980 439 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 RPS24P62847 133 aaKnown RBP26.22■■□□□ 1.79
SSBP3-202ENST00000357475 KRT81Q14533 505 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 AAK1Q2M2I8 961 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 EML3Q32P44 896 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 MFSD7Q6UXD7 560 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 TPGS1Q6ZTW0 290 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 E2F7Q96AV8 911 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 FAM83CQ9BQN1 747 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 CALN1Q9BXU9 219 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 EBF3Q9H4W6 596 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 KCNK12Q9HB15 430 aa26.22■■□□□ 1.79
SSBP3-202ENST00000357475 TICRRQ7Z2Z1 1910 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 OTOL1A6NHN0 477 aaPredicted RBP26.21■■□□□ 1.79
SSBP3-202ENST00000357475 CNTN5O94779 1100 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 CXCR5P32302 372 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 RWDD2BP57060 319 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 TMEM25Q86YD3 366 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 ADGRG2Q8IZP9 1017 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 CPXM2Q8N436 756 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 UBL4BQ8N7F7 174 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 HERPUD2Q9BSE4 406 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 DDX56Q9NY93 547 aaKnown RBP26.21■■□□□ 1.79
SSBP3-202ENST00000357475 MPP6Q9NZW5 540 aa26.21■■□□□ 1.79
SSBP3-202ENST00000357475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.21■■□□□ 1.79
SSBP3-202ENST00000357475 F5H5T6 163 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 GDI1P31150 447 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 IFNAR2P48551 515 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 NRG1Q02297 640 aaPredicted RBP26.2■■□□□ 1.79
SSBP3-202ENST00000357475 ZP2Q05996 745 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 ALFQ53S48 1182 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 PLCD3Q8N3E9 789 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 RPRD1AQ96P16 312 aaPredicted RBP26.2■■□□□ 1.79
SSBP3-202ENST00000357475 HPS4Q9NQG7 708 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 PLK2Q9NYY3 685 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 TBC1D14Q9P2M4 693 aa26.2■■□□□ 1.79
SSBP3-202ENST00000357475 ESPNB1AK53 854 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 EEF2KO00418 725 aaKnown RBP26.19■■□□□ 1.78
SSBP3-202ENST00000357475 KCNK3O14649 394 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 RWDD4Q6NW29 188 aaKnown RBP26.19■■□□□ 1.78
SSBP3-202ENST00000357475 RHBDF2Q6PJF5 856 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 SPOCD1Q6ZMY3 1216 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 EXD1Q8NHP7 514 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 TTC8Q8TAM2 541 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 DEPDC1BQ8WUY9 529 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 CSPG4P5Q96PW8 444 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 MFHAS1Q9Y4C4 1052 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 VCANP13611 3396 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 IGLV3-10A0A075B6K4 115 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 KRT10P13645 584 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 CDKN2BP42772 138 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 TPI1P60174 286 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 MTA1Q13330 715 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 C5orf22Q49AR2 442 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 LY6G5CQ5SRR4 150 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 RFX8Q6ZV50 586 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 ADHFE1Q8IWW8 467 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 YAF2Q8IY57 180 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 NAPGQ99747 312 aaPredicted RBP26.19■■□□□ 1.78
SSBP3-202ENST00000357475 EPAS1Q99814 870 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 TRMT61BQ9BVS5 477 aaKnown RBP26.19■■□□□ 1.78
SSBP3-202ENST00000357475 SPHK2Q9NRA0 654 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 THG1LQ9NWX6 298 aaKnown RBP26.19■■□□□ 1.78
SSBP3-202ENST00000357475 STIM2Q9P246 746 aa26.19■■□□□ 1.78
SSBP3-202ENST00000357475 COL4A2P08572 1712 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms