RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 NT5MQ9NPB1 228 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ADAM28Q9UKQ2 775 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 DOLKQ9UPQ8 538 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 NFASCO94856 1347 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 FSBPO95073 299 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 GUCA1CO95843 209 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 AVPR1AP37288 418 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ATXN3P54252 364 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 BMT2Q1RMZ1 405 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 FAM98BQ52LJ0 330 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 AGKQ53H12 422 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 LRRC55Q6ZSA7 311 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 L3MBTL3Q96JM7 780 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 SLC25A23Q9BV35 468 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 MAF1Q9H063 256 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 CD248Q9HCU0 757 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 SATB2Q9UPW6 733 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 MAPRE3Q9UPY8 281 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 RAD51BO15315 384 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 PSMD10O75832 226 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ALDH1A2O94788 518 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 CKMP06732 381 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 CASP5P51878 434 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 TBX4P57082 545 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ACMSDQ8TDX5 336 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 HAS1Q92839 578 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 CPB2Q96IY4 423 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 MRPL9Q9BYD2 267 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ZCCHC2Q9C0B9 1178 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 GPRC5DQ9NZD1 345 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 RPL26L1Q9UNX3 145 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 A0A087X1B8 175 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 A0A096LPK6 155 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 FGF10O15520 208 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 RNASEH1O60930 286 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ALDH2P05091 517 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ATP6V1B1P15313 513 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 MIPP30301 263 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 GLRBP48167 497 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 POLNQ7Z5Q5 900 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 STK40Q8N2I9 435 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 FAM120BQ96EK7 910 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ZFRQ96KR1 1074 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 CEP44Q9C0F1 390 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 STN1Q9H668 368 aaKnown RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 LRRC19Q9H756 370 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 POPDC2Q9HBU9 364 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 MYPNQ86TC9 1320 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 E9PBE3 544 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 PRR23D1E9PI22 279 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 TPST1O60507 370 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 KLHL41O60662 606 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 PRR23D2P0DMB1 279 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 YY1P25490 414 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 HK2P52789 917 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 PPATQ06203 517 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ACBD5Q5T8D3 534 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 IQSEC1Q6DN90 963 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 WDR59Q6PJI9 974 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 FAM71AQ8IYT1 594 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 KRT78Q8N1N4 520 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 OR56A4Q8NGH8 313 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF75CPQ92670 426 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-202ENST00000357250 NSMCE2Q96MF7 247 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ACTR8Q9H981 624 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 FAM153AQ9UHL3 310 aa12.01□□□□□ -0.49
COL9A1-202ENST00000357250 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 MEIS2O14770 477 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 ADAMTS3O15072 1205 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 LZTS3O60299 673 aaPredicted RBP12□□□□□ -0.49
COL9A1-202ENST00000357250 PEX10O60683 326 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 CNOT3O75175 753 aaKnown RBP12□□□□□ -0.49
COL9A1-202ENST00000357250 FAM58BPP0C7Q3 252 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 NOS2P35228 1153 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 DPYSL3Q14195 570 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 SAMD4BQ5PRF9 694 aaKnown RBP12□□□□□ -0.49
COL9A1-202ENST00000357250 IZUMO2Q6UXV1 221 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 OTOAQ7RTW8 1153 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 VSIG10LQ86VR7 867 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 OPTNQ96CV9 577 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 OSMRQ99650 979 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 SHCBP1LQ9BZQ2 653 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 IL22Q9GZX6 179 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 GBA2Q9HCG7 927 aaPredicted RBP12□□□□□ -0.49
COL9A1-202ENST00000357250 SNTG2Q9NY99 539 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 H3BMM5 538 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 RNF103O00237 685 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 NR5A2O00482 541 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 KLRC4O43908 158 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 NUDT17P0C025 328 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 ME2P23368 584 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 KDELR1P24390 212 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 TMED10P49755 219 aaKnown RBP12□□□□□ -0.49
COL9A1-202ENST00000357250 BMPR2Q13873 1038 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 LY6KQ17RY6 165 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 TRIM16LQ309B1 348 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 FBXO39Q8N4B4 442 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms