RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NPWQ8N729 165 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 GOLGA1Q92805 767 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 RNF34Q969K3 372 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 C16orf45Q96MC5 204 aaPredicted RBP4.17□□□□□ -1.74
LIG4-201ENST00000356922 ASB2Q96Q27 587 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 HEMGNQ9BXL5 484 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 NOL6Q9H6R4 1146 aaKnown RBP4.17□□□□□ -1.74
LIG4-201ENST00000356922 TRPV4Q9HBA0 871 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.17□□□□□ -1.74
LIG4-201ENST00000356922 EPS15L1Q9UBC2 864 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 IP6K2Q9UHH9 426 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 SDK1Q7Z5N4 2213 aa4.17□□□□□ -1.74
LIG4-201ENST00000356922 A0A0D9SEW6 157 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SART1O43290 800 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 CREB3O43889 395 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ACSL4O60488 711 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 DESP17661 470 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 AMPD1P23109 780 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PCK1P35558 622 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SSR1P43307 286 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 USP4Q13107 963 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PIGHQ14442 188 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 ARHGAP29Q52LW3 1261 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ODF2Q5BJF6 829 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ADGRF1Q5T601 910 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ERMARDQ5T6L9 678 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 FYB2Q5VWT5 728 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 NPNTQ6UXI9 565 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 POLNQ7Z5Q5 900 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 TFAP2DQ7Z6R9 452 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PQLC3Q8N755 202 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 LEMD2Q8NC56 503 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PCDH19Q8TAB3 1148 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 TSC1Q92574 1164 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ERLEC1Q96DZ1 483 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 TRIM11Q96F44 468 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SERPINB11Q96P15 392 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 DHX35Q9H5Z1 703 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 PCDH18Q9HCL0 1135 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ZFP14Q9HCL3 533 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 KCND1Q9NSA2 647 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.16□□□□□ -1.74
LIG4-201ENST00000356922 STOML2Q9UJZ1 356 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 INTS6Q9UL03 887 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 ZFP37Q9Y6Q3 630 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 HELZP42694 1942 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 DOCK4Q8N1I0 1966 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 GON4LQ3T8J9 2241 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 RNF103O00237 685 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PDE2AO00408 941 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 KRT86O43790 486 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 GLDCP23378 1020 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 KDELR1P24390 212 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 GDI1P31150 447 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 COG7P83436 770 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 RING1Q06587 406 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 DPYSL3Q14195 570 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PPP2R5DQ14738 602 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ARHGAP36Q6ZRI8 547 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ADAT2Q7Z6V5 191 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 ARHGAP18Q8N392 663 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 RNF10Q8N5U6 811 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 CELF5Q8N6W0 485 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 MSANTD4Q8NCY6 345 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 BPIFB1Q8TDL5 484 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SORCS1Q8WY21 1168 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 GCNAQ96QF7 691 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 HEBP1Q9NRV9 189 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 C2orf42Q9NWW7 574 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 STIM2Q9P246 746 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 DNAI1Q9UI46 699 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 STAP1Q9ULZ2 295 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 AP4E1Q9UPM8 1137 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 MTF2Q9Y483 593 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 PCDHA3Q9Y5H8 950 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 C19orf67A6NJJ6 358 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 E9PAM4 449 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 RRP9O43818 475 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 RNF8O76064 485 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 CYP17A1P05093 508 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PSMC3P17980 439 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 TACR2P21452 398 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 HOXD9P28356 352 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 MZF1P28698 734 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 HLA-FP30511 346 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 GNG11P61952 73 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 DHCR24Q15392 516 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ARHGAP15Q53QZ3 475 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 HS1BP3Q53T59 392 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 EMC10Q5UCC4 262 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 C11orf63Q6NUN7 778 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SYT10Q6XYQ8 523 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 LEKR1Q6ZMV7 388 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 NLRP14Q86W24 1093 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 FAM217AQ8IXS0 508 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 LGI2Q8N0V4 545 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 OSCP1Q8WVF1 389 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 VOPP1Q96AW1 172 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 BTN2A3PQ96KV6 586 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 LUC7LQ9NQ29 371 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms