RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GKN1Q9NS71 199 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 ZNF446Q9NWS9 450 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 DNMT3BQ9UBC3 853 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 HEY1Q9Y5J3 304 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 NUP205Q92621 2012 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 HELZP42694 1942 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 A0A1W2PRU2 124 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ZFXP17010 805 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ERCC2P18074 760 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 CARSP49589 748 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ZNF135P52742 658 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 NRG1Q02297 640 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 LMNB2Q03252 620 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 KCNC3Q14003 757 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 TRADDQ15628 312 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 MS4A13Q5J8X5 152 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ARL14EPQ8N8R7 260 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ATP6V0D2Q8N8Y2 350 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 AENQ8WTP8 325 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 WBP2Q969T9 261 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ZNF707Q96C28 371 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 C10orf88Q9H8K7 445 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 DRG1Q9Y295 367 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 REV3LO60673 3130 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 MFSD11O43934 449 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 MOSPD3O75425 235 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 STC2O76061 302 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 MAP3K6O95382 1288 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 SRGAP2BP0DMP2 458 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 PTPN2P17706 415 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 EPHB2P29323 1055 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 CDC25CP30307 473 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 HOXC13P31276 330 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 EIF3EP60228 445 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 COG7P83436 770 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 STXBP5Q5T5C0 1151 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 NUGGCQ68CJ6 796 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 NADSYN1Q6IA69 706 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 SHKBP1Q8TBC3 707 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 MRPS31Q92665 395 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 MRPL38Q96DV4 380 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 TCEAL4Q96EI5 215 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 PRMT1Q99873 361 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 PRKD2Q9BZL6 878 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ATXN3LQ9H3M9 355 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 PRDM16Q9HAZ2 1276 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 FAM114A2Q9NRY5 505 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 ZDHHC7Q9NXF8 308 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 DTLQ9NZJ0 730 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 NEU2Q9Y3R4 380 aa18.73■□□□□ 0.59
SMARCD3-202ENST00000356800 C2orf16Q68DN1 1984 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 E9PAM4 449 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 DAPK3O43293 454 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 GAS8O95995 478 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 KLKB1P03952 638 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 ITGAVP06756 1048 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 MBL2P11226 248 aaPredicted RBP18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 ZXDBP98169 803 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 AUHQ13825 339 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 PAFAH1B3Q15102 231 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 EMBQ6PCB8 327 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 B4GALNT4Q76KP1 1039 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 MTERF4Q7Z6M4 381 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 MAB21L3Q8N8X9 362 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 NETO2Q8NC67 525 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 ADAMTS19Q8TE59 1207 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 IFT81Q8WYA0 676 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 PLD4Q96BZ4 506 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 CCDC114Q96M63 670 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 TMEM121Q9BTD3 319 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 SMPD4Q9NXE4 827 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 SLC12A6Q9UHW9 1150 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 ZNF148Q9UQR1 794 aa18.72■□□□□ 0.59
SMARCD3-202ENST00000356800 CCDC195A0A1B0GUA6 201 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 ATP8B1O43520 1251 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 XYLBO75191 536 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 SEC31AO94979 1220 aaKnown RBP18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 RHOP08100 348 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 POU2F2P09086 479 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 RBP3P10745 1247 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 HDCP19113 662 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 NTHL1P78549 312 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 SLC5A9Q2M3M2 681 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 PRUNE1Q86TP1 453 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 ZC3H18Q86VM9 953 aaKnown RBP18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 UNC45BQ8IWX7 931 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 TP53INP2Q8IXH6 220 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 CCDC33Q8N5R6 958 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 ALLCQ8N6M5 410 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 NPWQ8N729 165 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 C12orf76Q8N812 135 aaPredicted RBP18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 GLIS1Q8NBF1 620 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 LRRN4Q8WUT4 740 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 TBC1D31Q96DN5 1066 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 DPP7Q9UHL4 492 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 VANGL2Q9ULK5 521 aa18.71■□□□□ 0.59
SMARCD3-202ENST00000356800 GOLGA6L7A0A1B0GV03 622 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 MCF2LO15068 1137 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 IRF1P10914 325 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 ECHS1P30084 290 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms