RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 MSI1O43347 362 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TRUB2O95900 331 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 HMBSP08397 361 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 MYBL1P10243 752 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SLC2A3P11169 496 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TARSP26639 723 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CDC25BP30305 580 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CASP14P31944 242 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 GJA4P35212 333 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 MATKP42679 507 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PTPN9P43378 593 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SLC11A2P49281 568 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 HARS2P49590 506 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SULT1E1P49888 294 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TNK2Q07912 1038 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TBX2Q13207 712 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 GAB4Q2WGN9 574 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PREPLQ4J6C6 727 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 DGKKQ5KSL6 1271 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 BRMS1LQ5PSV4 323 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 OTUD1Q5VV17 481 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 HGSNATQ68CP4 663 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 RIPOR1Q6ZS17 1223 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 MCOLN2Q8IZK6 566 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 DEFB106AQ8N104 65 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ATP6V0D2Q8N8Y2 350 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 FAM3CQ92520 227 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CD101Q93033 1021 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PBXIP1Q96AQ6 731 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PGAP3Q96FM1 320 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 NPY6RQ99463 290 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 LRFN3Q9BTN0 628 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SELENOOQ9BVL4 669 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SPHK2Q9NRA0 654 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ZNHIT6Q9NWK9 470 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SFMBT1Q9UHJ3 866 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TMEM59LQ9UK28 342 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 NENFQ9UMX5 172 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 NAALADL1Q9UQQ1 740 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PAXBP1Q9Y5B6 917 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PRUNE2Q8WUY3 3088 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 MUC22E2RYF6 1773 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 EYSQ5T1H1 3165 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TCRBV5S1A1TA0A578 114 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 AKR1B15C9JRZ8 316 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 AP5Z1O43299 807 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CACNG3O60359 315 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ACSL4O60488 711 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 RTN2O75298 545 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PDGFBP01127 241 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PENKP01210 267 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CYBBP04839 570 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 DESP17661 470 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 DRD1P21728 446 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CHKAP35790 457 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 OPRD1P41143 372 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 RPS9P46781 194 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SOX9P48436 509 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 EIF4EBP2Q13542 120 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PPP2R5DQ14738 602 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 UBXN2BQ14CS0 331 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 DCAF6Q58WW2 860 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TMEM196Q5HYL7 178 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 LY6G5CQ5SRR4 150 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ACBD5Q5T8D3 534 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 RNF43Q68DV7 783 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 GRAMD4Q6IC98 578 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SND1Q7KZF4 910 aaKnown RBP eCLIP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 BNIPLQ7Z465 357 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ETFBKMTQ8IXQ9 262 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SYNPOQ8N3V7 929 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ZNF557Q8N988 423 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 HJURPQ8NCD3 748 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TTC16Q8NEE8 873 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 FLCNQ8NFG4 579 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 OR8K1Q8NGG5 319 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CCDC26Q8TAB7 109 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SLC30A5Q8TAD4 765 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CPLX3Q8WVH0 158 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 NT5C3BQ969T7 300 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CLDN23Q96B33 292 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ZNF653Q96CK0 615 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CHFRQ96EP1 664 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 XPO6Q96QU8 1125 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 PRRX2Q99811 253 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 P2RY13Q9BPV8 354 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 FOXQ1Q9C009 403 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 KCNH6Q9H252 994 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 CHRDQ9H2X0 955 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ALG2Q9H553 416 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 ABHD10Q9NUJ1 306 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 DDIT4Q9NX09 232 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 GTSE1Q9NYZ3 720 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 AGO1Q9UL18 857 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 SCINQ9Y6U3 715 aa4.12□□□□□ -1.75
CNOT4-202ENST00000356162 NYNRINQ9P2P1 1898 aaKnown RBP4.12□□□□□ -1.75
CNOT4-202ENST00000356162 TYW5A2RUC4 315 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ANKRD62A6NC57 917 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 C2CD4BA6NLJ0 364 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms