RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CLDN3O15551 220 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 KRT86O43790 486 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 KIF5CO60282 957 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 FAM189A1O60320 539 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 EPN2O95208 641 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 IL18RAPO95256 599 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PRKCBP05771 671 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 FCARP24071 287 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 AXLP30530 894 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 STAT1P42224 750 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 CXCL12P48061 93 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 SCNN1GP51170 649 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 MBTD1Q05BQ5 628 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PRPF4BQ13523 1007 aaKnown RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 ASTE1Q2TB18 679 aaPredicted RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 DCAF4L1Q3SXM0 396 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 ZACNQ401N2 412 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PABPC1LQ4VXU2 614 aaKnown RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 RTP2Q5QGT7 225 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 STPG1Q5TH74 334 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PPP1R2P3Q6NXS1 205 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PRSS55Q6UWB4 352 aaPredicted RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 RAD9BQ6WBX8 426 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 LCNL1Q6ZST4 164 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 RRAGAQ7L523 313 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 RHPN2Q8IUC4 686 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 CBWD2Q8IUF1 395 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 WDR49Q8IV35 697 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 CD302Q8IX05 232 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 RNF149Q8NC42 400 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PHC3Q8NDX5 983 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 FBXL13Q8NEE6 735 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 LMO3Q8TAP4 145 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 ING5Q8WYH8 240 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 ZCCHC14Q8WYQ9 949 aaKnown RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 TAF4BQ92750 862 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 ACO2Q99798 780 aaKnown RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 SH2D3AQ9BRG2 576 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 MSTO1Q9BUK6 570 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 KIFC3Q9BVG8 833 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PLA2G2FQ9BZM2 168 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 INTS2Q9H0H0 1204 aaKnown RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 NHEJ1Q9H9Q4 299 aaPredicted RBP7.37□□□□□ -1.23
VPS13A-201ENST00000355766 IFT122Q9HBG6 1241 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 PTPRHQ9HD43 1115 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 SIX2Q9NPC8 291 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 HCFC1R1Q9NWW0 138 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 ADAM28Q9UKQ2 775 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 INTUQ9ULD6 942 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 SF3B1O75533 1304 aaKnown RBP eCLIP7.36□□□□□ -1.234e-7■■■■■ 34.5
VPS13A-201ENST00000355766 EVPLQ92817 2033 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ANO9A1A5B4 782 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 LRRIQ3A6PVS8 624 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ANKRD63C9JTQ0 380 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 TAF4O00268 1085 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ABLIM1O14639 778 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 EPHB6O15197 1021 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 PJA2O43164 708 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 HPXP02790 462 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ADRB2P07550 413 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ZNF806P0C7X5 589 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ITGA4P13612 1032 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 TNNT1P13805 278 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 TBXAS1P24557 533 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 SOX5P35711 763 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 NOVA1P51513 510 aaKnown RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 KIF11P52732 1056 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 VAV2P52735 878 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 POLR2FP61218 127 aaKnown RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 TUBB4BP68371 445 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 DAB2P98082 770 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 NCBP1Q09161 790 aaKnown RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 CCDC6Q16204 474 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ASIC2Q16515 512 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 SLC18A3Q16572 532 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 SLC5A9Q2M3M2 681 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 CBWD6Q4V339 395 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ARHGAP29Q52LW3 1261 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 CBWD3Q5JTY5 395 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 CBWD5Q5RIA9 395 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 C1orf220Q5T0J3 134 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ATF7IP2Q5U623 682 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 BNC2Q6ZN30 1099 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 TOGARAM2Q6ZUX3 1019 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 CEP68Q76N32 757 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 REXO1L1PQ8IX06 675 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 SPEM1Q8N4L4 309 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 TTC39CQ8N584 583 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 RNF10Q8N5U6 811 aaKnown RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 SLC7A14Q8TBB6 771 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ZSCAN18Q8TBC5 510 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 CPLX3Q8WVH0 158 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 FAM3CQ92520 227 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 ELSPBP1Q96BH3 223 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 LOXL4Q96JB6 756 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 C16orf45Q96MC5 204 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-201ENST00000355766 FNBP1Q96RU3 617 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 GAD1Q99259 594 aa7.36□□□□□ -1.23
VPS13A-201ENST00000355766 CGRRF1Q99675 332 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms