RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PRAMEP78395 509 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 GTF2BQ00403 316 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 RAB39AQ14964 217 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 OXA1LQ15070 435 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 SMTNL2Q2TAL5 461 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 ARL13BQ3SXY8 428 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 PPP1R2P3Q6NXS1 205 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 EPGNQ6UW88 154 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 BBS12Q6ZW61 710 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 IGFN1Q86VF2 1251 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 FAM156AQ8NDB6 213 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 ZSCAN18Q8TBC5 510 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 ACDQ96AP0 544 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 FRMD8P1Q9BZ68 369 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 DUS2Q9NX74 493 aaKnown RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 PTBP2Q9UKA9 531 aaKnown RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 SNX9Q9Y5X1 595 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 SLC30A1Q9Y6M5 507 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 RGSL1A5PLK6 1076 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 TMEM114B3SHH9 223 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 GPR25O00155 361 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 DYNC1LI2O43237 492 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 SNAP91O60641 907 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 PLIN3O60664 434 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 GAS7O60861 476 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 ENO3P13929 434 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 GRK2P25098 689 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 GNA15P30679 374 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 ABCE1P61221 599 aaKnown RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 MTX3Q5HYI7 312 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 NHSL2Q5HYW2 709 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 KCNT1Q5JUK3 1230 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 STXBP5Q5T5C0 1151 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 TRMT10BQ6PF06 316 aaKnown RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 MAMDC4Q6UXC1 1216 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 PTAR1Q7Z6K3 402 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 PGAM4Q8N0Y7 254 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 ZNF786Q8N393 782 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 MAPK15Q8TD08 544 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 TMC2Q8TDI7 906 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 RCN3Q96D15 328 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 WNK4Q96J92 1243 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 OR52B2Q96RD2 323 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 CIB1Q99828 191 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 AMNQ9BXJ7 453 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 ZFYVE28Q9HCC9 887 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 KLHL3Q9UH77 587 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 DAPK2Q9UIK4 370 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 CPQQ9Y646 472 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 FER1L6Q2WGJ9 1857 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 C1orf232A0A0U1RR37 186 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 SLC16A4O15374 487 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 EIF2S1P05198 315 aaKnown RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 HARS2P49590 506 aaKnown RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 IGBP1P78318 339 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TRAF2Q12933 501 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 NFATC3Q12968 1075 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 NME3Q13232 169 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 PICALMQ13492 652 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TRPC3Q13507 836 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 LSM12Q3MHD2 195 aaKnown RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 SLC9A4Q6AI14 798 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 GALNT18Q6P9A2 607 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 DCUN1D2Q6PH85 259 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TTC33Q6PID6 262 aaPredicted RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 SLC51AQ86UW1 340 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 ZC3H7AQ8IWR0 971 aaKnown RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 FAF2Q96CS3 445 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TRPV6Q9H1D0 765 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 WDR41Q9HAD4 459 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 POU2F3Q9UKI9 436 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 ERVK-11Q9UQG0 969 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 GREB1LQ9C091 1923 aaPredicted RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 CHADO15335 359 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 ZC3H11AO75152 810 aaKnown RBP eCLIP8.05□□□□□ -1.122e-9■■■■■ 26.8
CD46-203ENST00000354848 GNAO1P09471 354 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 MMP8P22894 467 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 GLDCP23378 1020 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TTKP33981 857 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 NUMBP49757 651 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 EVA1CP58658 441 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 NDUFA5Q16718 116 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 UNC5AQ6ZN44 842 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TIFABQ6ZNK6 161 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 ZNF781Q8N8C0 355 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 RP9Q8TA86 221 aaKnown RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 TFAP2CQ92754 450 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 ACO2Q99798 780 aaKnown RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 PSD2Q9BQI7 771 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 MROQ9BYG7 248 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 KLHL25Q9H0H3 589 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 RNPEPQ9H4A4 650 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 SNX13Q9Y5W8 968 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.05□□□□□ -1.12
CD46-203ENST00000354848 TCRBV5S1A1TA0A578 114 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 TRIM64A6NGJ6 449 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 GLRA3O75311 464 aa8.05□□□□□ -1.12
CD46-203ENST00000354848 RALBP11234 206 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms