RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 PABPC5Q96DU9 382 aaKnown RBP20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 SMG9Q9H0W8 520 aaKnown RBP20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 PRDM16Q9HAZ2 1276 aa20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 ARHGEF4Q9NR80 690 aa20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 RBM12Q9NTZ6 932 aaKnown RBP20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 STIM2Q9P246 746 aa20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 LSM7Q9UK45 103 aaKnown RBP20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 AGO1Q9UL18 857 aaKnown RBP20.77■□□□□ 0.92
SIGMAR1-202ENST00000353468 GOLGA6L7A0A1B0GV03 622 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 LEFTY2O00292 366 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 APOL1O14791 398 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 GREM1O60565 184 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 ZFXP17010 805 aaPredicted RBP20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 ARTNQ5T4W7 220 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 RWDD4Q6NW29 188 aaKnown RBP20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 CHSY1Q86X52 802 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 DDX42Q86XP3 938 aaKnown RBP eCLIP20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 ZNF683Q8IZ20 524 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 PRELID2Q8N945 189 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 LRRN4CLQ8ND94 238 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 USP13Q92995 863 aaPredicted RBP20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 TBC1D31Q96DN5 1066 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 TDP1Q9NUW8 608 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 CFAP97Q9P2B7 532 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 VANGL2Q9ULK5 521 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 SH3BP1Q9Y3L3 701 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 CCDC188H7C350 402 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 LATS1O95835 1130 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 ERCC2P18074 760 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 TACR2P21452 398 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 HOXC13P31276 330 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 FAM133BQ5BKY9 247 aaKnown RBP20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 FBXL22Q6P050 247 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 Q6ZNB5 142 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 HTR3DQ70Z44 454 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 ARID3BQ8IVW6 561 aaPredicted RBP20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 PLD5Q8N7P1 536 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 TTC16Q8NEE8 873 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 SH3RF2Q8TEC5 729 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 ETNK2Q9NVF9 386 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 STOML2Q9UJZ1 356 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 CCL26Q9Y258 94 aa20.76■□□□□ 0.91
SIGMAR1-202ENST00000353468 APOC4-APOC2K7ER74 178 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 DCLK1O15075 740 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 APOC2P02655 101 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 TGM2P21980 687 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 SLC6A4P31645 630 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 ADGRF1Q5T601 910 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 GET4Q7L5D6 327 aaPredicted RBP20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 NPAS3Q8IXF0 933 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 TTC13Q8NBP0 860 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 FGF13Q92913 245 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 HAUS1Q96CS2 278 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 MSLNLQ96KJ4 702 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 DDX50Q9BQ39 737 aaKnown RBP20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 HOMER3Q9NSC5 361 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 SAE1Q9UBE0 346 aaPredicted RBP20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 PPARGC1AQ9UBK2 798 aaKnown RBP20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 NEU3Q9UQ49 428 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 ZNF510Q9Y2H8 683 aa20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 R3HDM2Q9Y2K5 976 aaKnown RBP20.75■□□□□ 0.91
SIGMAR1-202ENST00000353468 IGLV3-10A0A075B6K4 115 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 F5H5T6 163 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 WEE1P30291 646 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 CYP1B1Q16678 543 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 NCBP2-AS2Q69YL0 99 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 GPR153Q6NV75 609 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 C1orf228Q6PIY5 440 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 LGI2Q8N0V4 545 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 ZSCAN18Q8TBC5 510 aaPredicted RBP20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 C1orf54Q8WWF1 131 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 P3H4Q92791 437 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 MAGOHBQ96A72 148 aaKnown RBP20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 RIPOR3Q96MK2 946 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 CATSPERBQ9H7T0 1116 aa20.74■□□□□ 0.91
SIGMAR1-202ENST00000353468 HELZP42694 1942 aaKnown RBP20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 E2F8A0AVK6 867 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 DRGXA6NNA5 263 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 SCAMP3O14828 347 aaKnown RBP20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 FGF10O15520 208 aaPredicted RBP20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 PHF2O75151 1096 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 PRAMEF12O95522 483 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 CCNG2Q16589 344 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 RFWD3Q6PCD5 774 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 NPNTQ6UXI9 565 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 ACTL9Q8TC94 416 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 MYLIPQ8WY64 445 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 ATG4AQ8WYN0 398 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 IGSF8Q969P0 613 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 RPRD1AQ96P16 312 aaPredicted RBP20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 FAM118BQ9BPY3 351 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 ZYG11BQ9C0D3 744 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 DDX47Q9H0S4 455 aaKnown RBP20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 LRRC19Q9H756 370 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 MPP6Q9NZW5 540 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 MFHAS1Q9Y4C4 1052 aa20.73■□□□□ 0.91
SIGMAR1-202ENST00000353468 TCF3P15923 654 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 PECAM1P16284 738 aaPredicted RBP20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 MTHFRP42898 656 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 OTUD4Q01804 1114 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms