RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CAPN7Q9Y6W3 813 aa20.97■□□□□ 0.95
CHRNA3-202ENST00000348639 NCAM2O15394 837 aa20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 TTC39BQ5VTQ0 682 aaPredicted RBP20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 LHX8Q68G74 356 aa20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 SLC24A5Q71RS6 500 aa20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 CTAGE3PQ8IX95 158 aa20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 PPM1NQ8N819 430 aa20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 TKTL2Q9H0I9 626 aa20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 HMX1Q9NP08 348 aaPredicted RBP20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 PCDHA11Q9Y5I1 949 aa20.96■□□□□ 0.95
CHRNA3-202ENST00000348639 CXorf49A8MYA2 514 aaPredicted RBP20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 GOLGA8RI6L899 631 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 FAM155BO75949 473 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 SLC18A2Q05940 514 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 LRRC8BQ6P9F7 803 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 SH2D5Q6ZV89 423 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 CYS1Q717R9 158 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 TAC4Q86UU9 113 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 ZNF280BQ86YH2 543 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 TP53INP2Q8IXH6 220 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 ZNF567Q8N184 647 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 PDCD7Q8N8D1 485 aaKnown RBP20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 TCP10LQ8TDR4 215 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 SERAC1Q96JX3 654 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 BRD8Q9H0E9 1235 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 SEPT10Q9P0V9 454 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 IGSF9Q9P2J2 1179 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 ZNF638Q14966 1978 aaKnown RBP20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 YWHAHQ04917 246 aaPredicted RBP20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 DNAJC3Q13217 504 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 SEPT7Q16181 437 aaKnown RBP20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 C4orf50Q6ZRC1 276 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 LRRC8CQ8TDW0 803 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 KLF6Q99612 283 aaPredicted RBP20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 EPAS1Q99814 870 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 TSEN34Q9BSV6 310 aaKnown RBP20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 OR12D3Q9UGF7 316 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 STARD13Q9Y3M8 1113 aa20.95■□□□□ 0.94
CHRNA3-202ENST00000348639 FAM159BA6NKW6 160 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 KRT37O76014 449 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 PSMB4P28070 264 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 SCTRP47872 440 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 FAM189BP81408 668 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 DSC1Q08554 894 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 LGSNQ5TDP6 509 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 FAM47EQ6ZV65 393 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 SPATA2LQ8IUW3 424 aaPredicted RBP20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 DQX1Q8TE96 717 aaKnown RBP20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 APBB2Q92870 758 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 CFHR5Q9BXR6 569 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 SMYD2Q9NRG4 433 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 SDR42E2A6NKP2 422 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 F5H423 210 aaPredicted RBP20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 B4GALT3O60512 393 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 DDHD2O94830 711 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 IGLV3-25P01717 112 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 SNRPAP09012 282 aaKnown RBP20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 ADRA1DP25100 572 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 PPIDQ08752 370 aaKnown RBP20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 CLLU1OSQ5K130 101 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 STEAP4Q687X5 459 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 SCAMP5Q8TAC9 235 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 SPOCK2Q92563 424 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 STAMBPL1Q96FJ0 436 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 APOPT1Q96IL0 206 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 CEP41Q9BYV8 373 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 MOCS1Q9NZB8 636 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 PHTF1Q9UMS5 762 aa20.94■□□□□ 0.94
CHRNA3-202ENST00000348639 LPXNO60711 386 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 MX2P20592 715 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 IFRD2Q12894 506 aaPredicted RBP20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 EIF4EBP2Q13542 120 aaPredicted RBP20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 NOMO2Q5JPE7 1267 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 TRMT10BQ6PF06 316 aaKnown RBP20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 PID1Q7Z2X4 250 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 NPWQ8N729 165 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 SLC43A3Q8NBI5 491 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 LINC01599Q8WXQ3 324 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 TRIM56Q9BRZ2 755 aaKnown RBP20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 VPS11Q9H270 941 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 ABCF3Q9NUQ8 709 aa20.93■□□□□ 0.94
CHRNA3-202ENST00000348639 TRIM49D1C9J1S8 452 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 H0YHG0 523 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 TMEM189-UBE2V1I3L0A0 370 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 EDF1O60869 148 aaKnown RBP20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 LRIG2O94898 1065 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 GSTA1P08263 222 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 PYGBP11216 843 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 ALADP13716 330 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 PTPN3P26045 913 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 SERPINB6P35237 376 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 NEK3P51956 506 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 CCNJLQ8IV13 435 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 URGCPQ8TCY9 931 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 ZNF75CPQ92670 426 aaPredicted RBP20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 RNF34Q969K3 372 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 HDAC11Q96DB2 347 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 OSBPL2Q9H1P3 480 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 ABCC13Q9NSE7 274 aa20.92■□□□□ 0.94
CHRNA3-202ENST00000348639 KLHL14Q9P2G3 628 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms