RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ZDHHC14Q8IZN3 488 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 RASGEF1CQ8N431 466 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 PQLC3Q8N755 202 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 PCDH19Q8TAB3 1148 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 SMARCD2Q92925 531 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 IGSF8Q969P0 613 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 FAF2Q96CS3 445 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 C1orf74Q96LT6 269 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 CSPG4P5Q96PW8 444 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 OSBPL8Q9BZF1 889 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 STOML2Q9UJZ1 356 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 VANGL2Q9ULK5 521 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 MFHAS1Q9Y4C4 1052 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 E9PAM4 449 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 TCF3P15923 654 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 SP100P23497 879 aaPredicted RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 GBP2P32456 591 aaPredicted RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 SLC11A2P49281 568 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 SGSHP51688 502 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 VCPP55072 806 aaKnown RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 NRG1Q02297 640 aaPredicted RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 SMAD4Q13485 552 aaKnown RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 ANKRD20A8PQ5CZ79 823 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 DNTTIP2Q5QJE6 756 aaKnown RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 KAZNQ674X7 775 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 TANGO2Q6ICL3 276 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 FBXL22Q6P050 247 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 CHSY1Q86X52 802 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 PRICKLE1Q96MT3 831 aaPredicted RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 NECTIN4Q96NY8 510 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 RNF157Q96PX1 679 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 DCLK3Q9C098 648 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 PRDM6Q9NQX0 595 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 ETNK2Q9NVF9 386 aa19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 KIF26AQ9ULI4 1882 aaPredicted RBP19.63■□□□□ 0.73
CHMP4A-201ENST00000347519 CUL9Q8IWT3 2517 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 E2F8A0AVK6 867 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 EEF2KO00418 725 aaKnown RBP19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 GFRA2O00451 464 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 CES2O00748 559 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 TSPAN3O60637 253 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 LAMP2P13473 410 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 PTPN7P35236 360 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 DPYSQ14117 519 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 PPP2R5EQ16537 467 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 ODF2Q5BJF6 829 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 TFDP3Q5H9I0 405 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 SEL1L2Q5TEA6 688 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 ADAT2Q7Z6V5 191 aaKnown RBP19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 DDX42Q86XP3 938 aaKnown RBP eCLIP19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 SLC13A5Q86YT5 568 aaPredicted RBP19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 FAM217AQ8IXS0 508 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 LGI2Q8N0V4 545 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 CELF5Q8N6W0 485 aaKnown RBP19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 HLA-CQ95604 372 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 ZNF670Q9BS34 389 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 PLA2G2FQ9BZM2 168 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 TRPV4Q9HBA0 871 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 CDC23Q9UJX2 597 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 LSM7Q9UK45 103 aaKnown RBP19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 MYOFQ9NZM1 2061 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 XIRP2A4UGR9 3374 aa19.62■□□□□ 0.73
CHMP4A-201ENST00000347519 H3BRJ5 948 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 CNTN5O94779 1100 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 LATS1O95835 1130 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 HOXC13P31276 330 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 TPI1P60174 286 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 COPS2P61201 443 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 ADGRF1Q5T601 910 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 RFX8Q6ZV50 586 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 CIR1Q86X95 450 aaPredicted RBP19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 RFX6Q8HWS3 928 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 MAP7D3Q8IWC1 876 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 CFAP52Q8N1V2 620 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 EPAS1Q99814 870 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 LINC00597Q9H2U6 94 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 KIF9Q9HAQ2 790 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 ARHGEF4Q9NR80 690 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 MPP6Q9NZW5 540 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 NR2E1Q9Y466 385 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 MRFAP1Q9Y605 127 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 WNT6Q9Y6F9 365 aa19.61■□□□□ 0.73
CHMP4A-201ENST00000347519 IGLV3-10A0A075B6K4 115 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 DRGXA6NNA5 263 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 HEPACAM2A8MVW5 462 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 FGGP02679 453 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 ARL4AP40617 200 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 HCAR3P49019 387 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 DYNLT1P63172 113 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 KLF1Q13351 362 aaPredicted RBP19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 SIX1Q15475 284 aaPredicted RBP19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 ALFQ53S48 1182 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 PARM1Q6UWI2 310 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 NETO2Q8NC67 525 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 ACTRT1Q8TDG2 376 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 TBC1D31Q96DN5 1066 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 ASIC4Q96FT7 647 aa19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 RCOR3Q9P2K3 495 aaPredicted RBP19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 TTC7AQ9ULT0 858 aaPredicted RBP19.6■□□□□ 0.73
CHMP4A-201ENST00000347519 ZNF487B1APH4 448 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms