RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PDPRQ8NCN5 879 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 CHST12Q9NRB3 414 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 SMIM22K7EJ46 135 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 DPYSQ14117 519 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 SMCO1Q147U7 214 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 ARCQ7LC44 396 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 RNF145Q96MT1 663 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 TBCBQ99426 244 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 MOV10Q9HCE1 1003 aaKnown RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 SH3BP1Q9Y3L3 701 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 LOC100506127A0A0U1RQW1 187 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 FCHO1O14526 889 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 NMT2O60551 498 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 EPHB2P29323 1055 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 NMT1P30419 496 aaKnown RBP19.78■□□□□ 0.76
HDAC4-201ENST00000345617 SOX11P35716 441 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 ATF7IP2Q5U623 682 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 SFRP1Q8N474 314 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 ERBB3P21860 1342 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 SMNDC1O75940 238 aaKnown RBP eCLIP19.78■□□□□ 0.76
HDAC4-201ENST00000345617 EPN2O95208 641 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 C1QBPQ07021 282 aaKnown RBP19.78■□□□□ 0.76
HDAC4-201ENST00000345617 UXS1Q8NBZ7 420 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 DSN1Q9H410 356 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 SIK3Q9Y2K2 1263 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 LRPAP1P30533 357 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 ZDHHC17Q8IUH5 632 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 THAP2Q9H0W7 228 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 KCNH1O95259 989 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 PRDM8Q9NQV8 689 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF609O15014 1411 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 MYMKA6NI61 221 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 KCNJ1P48048 391 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 BNIP2Q12982 314 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 OTUD3Q5T2D3 398 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-201ENST00000345617 MUC13Q9H3R2 512 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF112Q9UJU3 913 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 UNC5CO95185 931 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 COX4I2Q96KJ9 171 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 LBPP18428 481 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 AVPR1AP37288 418 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 GRIK3Q13003 919 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 FAM92BQ6ZTR7 304 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 EIF3MQ7L2H7 374 aaKnown RBP19.78■□□□□ 0.76
HDAC4-201ENST00000345617 TRIM48Q8IWZ4 208 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 OR52L1Q8NGH7 329 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 DPF2Q92785 391 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 SLC38A2Q96QD8 506 aa19.78■□□□□ 0.76
HDAC4-201ENST00000345617 ZW10O43264 779 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 ETS1P14921 441 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 ITGALP20701 1170 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 CASP5P51878 434 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 PRR5LQ6MZQ0 368 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 BSNDQ8WZ55 320 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 ADRA2BP18089 450 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 TNK2Q07912 1038 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 DALRD3Q5D0E6 543 aaKnown RBP19.77■□□□□ 0.76
HDAC4-201ENST00000345617 SWT1Q5T5J6 900 aaKnown RBP19.77■□□□□ 0.76
HDAC4-201ENST00000345617 CXXC5Q7LFL8 322 aaKnown RBP19.77■□□□□ 0.76
HDAC4-201ENST00000345617 BGNP21810 368 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 SLC11A2P49281 568 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 RNF43Q68DV7 783 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■■■■ 171.9
HDAC4-201ENST00000345617 GPRASP2Q96D09 838 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 FNDC5Q8NAU1 212 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 OR56A4Q8NGH8 313 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 BLOC1S5Q8TDH9 187 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 ADAM33Q9BZ11 813 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 ANAPC2Q9UJX6 822 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 TNPO3Q9Y5L0 923 aaKnown RBP19.77■□□□□ 0.76
HDAC4-201ENST00000345617 GSG1L2A8MUP6 293 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 F5H6K3 240 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 MDM4O15151 490 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 FOXN1O15353 648 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 ACOT2P49753 483 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 KLRC3Q07444 240 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 SLC25A41Q8N5S1 370 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 MASTLQ96GX5 879 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 ANKZF1Q9H8Y5 726 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 NMRK2Q9NPI5 230 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 PHF11Q9UIL8 331 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 PLK4O00444 970 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 GSTM5P46439 218 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 RENBPP51606 427 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 RBM43Q6ZSC3 357 aaKnown RBP19.77■□□□□ 0.76
HDAC4-201ENST00000345617 SERAC1Q96JX3 654 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 TEKT5Q96M29 485 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 TEX13BQ9BXU2 312 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 TMEM260Q9NX78 707 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 MFHAS1Q9Y4C4 1052 aa19.77■□□□□ 0.76
HDAC4-201ENST00000345617 NAALADL1Q9UQQ1 740 aa19.77■□□□□ 0.75
HDAC4-201ENST00000345617 CLUHO75153 1309 aa19.77■□□□□ 0.75
HDAC4-201ENST00000345617 AP1G2O75843 785 aa19.77■□□□□ 0.75
HDAC4-201ENST00000345617 ELF3P78545 371 aaPredicted RBP19.77■□□□□ 0.75
HDAC4-201ENST00000345617 PKN1Q16512 942 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 RBM20Q5T481 1227 aaKnown RBP19.76■□□□□ 0.75
HDAC4-201ENST00000345617 ZCCHC9Q8N567 271 aaKnown RBP19.76■□□□□ 0.75
HDAC4-201ENST00000345617 SPATA5L1Q9BVQ7 753 aa19.76■□□□□ 0.75
HDAC4-201ENST00000345617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms