RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MAGEE2Q8TD90 523 aaPredicted RBP18.47■□□□□ 0.55
SMC4-201ENST00000344722 PTCD3Q96EY7 689 aaKnown RBP18.47■□□□□ 0.55
SMC4-201ENST00000344722 TCF12Q99081 682 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 RTKNQ9BST9 563 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 MAP2P11137 1827 aaKnown RBP18.47■□□□□ 0.55
SMC4-201ENST00000344722 SEC24AO95486 1093 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 ARP10275 920 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 MARSP56192 900 aaKnown RBP18.47■□□□□ 0.55
SMC4-201ENST00000344722 TTC30AQ86WT1 665 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 HTR3CQ8WXA8 447 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 HSD3B7Q9H2F3 369 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 CCDC154A6NI56 674 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 ADRA2BP18089 450 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 SQLEQ14534 574 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 C4orf19Q8IY42 314 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 BTBD9Q96Q07 612 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 SMARCAD1Q9H4L7 1026 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 IL17RBQ9NRM6 502 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 PCDHA11Q9Y5I1 949 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 NCAM1P13591 858 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 GRIK1P39086 918 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 CNPY1Q3B7I2 92 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 CCDC149Q6ZUS6 474 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 KBTBD2Q8IY47 623 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 ITFG1Q8TB96 612 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 ASB2Q96Q27 587 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 SLC4A5Q9BY07 1137 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 PIF1Q9H611 641 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 A0A1W2PPM1 405 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 ZMPSTE24O75844 475 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 TNK2Q07912 1038 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 SCARA3Q6AZY7 606 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 OSBPL6Q9BZF3 934 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 WWOXQ9NZC7 414 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 HACD1B0YJ81 288 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 GAS2O43903 313 aaKnown RBP18.46■□□□□ 0.55
SMC4-201ENST00000344722 IMPDH2P12268 514 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 PPATQ06203 517 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 TAB1Q15750 504 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 HGSNATQ68CP4 663 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 GLIS3Q8NEA6 775 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 TMEM176AQ96HP8 235 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 APOL5Q9BWW9 433 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 ERVK-5Q9HDB9 667 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 ETNK2Q9NVF9 386 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 ADAM28Q9UKQ2 775 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 PRR5-ARHGAP8B1AHC4 643 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 VPS26AO75436 327 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 GH1P01241 217 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 KDELR1P24390 212 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 GRIA3P42263 894 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 GABRB2P47870 512 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 ARHGAP8P85298 464 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 TIGD7Q6NT04 549 aaPredicted RBP18.46■□□□□ 0.55
SMC4-201ENST00000344722 EFHBQ8N7U6 833 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 UBASH3BQ8TF42 649 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 MTG1Q9BT17 334 aaPredicted RBP18.46■□□□□ 0.55
SMC4-201ENST00000344722 CYP3A43Q9HB55 503 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 LGALS13Q9UHV8 139 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 SYNDIG1LA6NDD5 238 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 TPD52L2O43399 206 aaKnown RBP18.46■□□□□ 0.55
SMC4-201ENST00000344722 MSH3P20585 1137 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 TALDO1P37837 337 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
SMC4-201ENST00000344722 CDH17Q12864 832 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 KHDC1Q4VXA5 237 aaKnown RBP18.46■□□□□ 0.55
SMC4-201ENST00000344722 ALG3Q92685 438 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 DNAJC19Q96DA6 116 aa18.46■□□□□ 0.55
SMC4-201ENST00000344722 TMEM191CA6NGB0 347 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 ARIH2O95376 493 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 MT-CO1P00395 513 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 PRIM2P49643 509 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 POC5Q8NA72 575 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 TADA1Q96BN2 335 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 ROGDIQ9GZN7 287 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 KRT84Q9NSB2 600 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 ZNF180Q9UJW8 692 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 KLHL20Q9Y2M5 609 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 CLUHO75153 1309 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 ORC1Q13415 861 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 RBM15BQ8NDT2 890 aaKnown RBP18.45■□□□□ 0.54
SMC4-201ENST00000344722 PWWP2AQ96N64 755 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 OLFM1Q99784 485 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 BLVRAP53004 296 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 RTP1P59025 263 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 MYL6P60660 151 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 TIMM50Q3ZCQ8 353 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 SPATA2LQ8IUW3 424 aaPredicted RBP18.45■□□□□ 0.54
SMC4-201ENST00000344722 FAM71AQ8IYT1 594 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 WDCPQ9H6R7 721 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 DPP3Q9NY33 737 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 LSM1O15116 133 aaKnown RBP18.45■□□□□ 0.54
SMC4-201ENST00000344722 CD3EAPO15446 510 aaKnown RBP18.45■□□□□ 0.54
SMC4-201ENST00000344722 MAMLD1Q13495 774 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 SLC15A2Q16348 729 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 SEZ6Q53EL9 994 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 ZNF276Q8N554 614 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 HPS1Q92902 700 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 TMCC3Q9ULS5 477 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 MTF2Q9Y483 593 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms