RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF534Q76KX8 674 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 CYP4X1Q8N118 509 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 SPATA17Q96L03 361 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 OSBPL2Q9H1P3 480 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 CFAP69A5D8W1 941 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 C5orf60A6NFR6 353 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 CREB1P16220 341 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 GCAP28676 217 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
CDC42-202ENST00000344548 BBS9Q3SYG4 887 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 CCDC38Q502W7 563 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 MSANTD2Q6P1R3 559 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 PCGF5Q86SE9 256 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 CAND1Q86VP6 1230 aaKnown RBP13.98□□□□□ -0.17
CDC42-202ENST00000344548 HOOK3Q86VS8 718 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 TLCD1Q96CP7 247 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 MYEOVQ96EZ4 313 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 ZNF419Q96HQ0 510 aaPredicted RBP13.98□□□□□ -0.17
CDC42-202ENST00000344548 ZNF558Q96NG5 402 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 TSPYL1Q9H0U9 437 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 SEPT10Q9P0V9 454 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 BACE2Q9Y5Z0 518 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 GOLGA6L10A6NI86 522 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 E7ESA3 106 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 RNF103O00237 685 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 HMBSP08397 361 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 LMAN1P49257 510 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 OLIG2Q13516 323 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 BRMS1LQ5PSV4 323 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 CENPUQ71F23 418 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 UBE2Q1Q7Z7E8 422 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 ZNF567Q8N184 647 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 FBXO36Q8NEA4 188 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 TMEM169Q96HH4 297 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 SERPINB12Q96P63 405 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 HAPLN3Q96S86 360 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 EPAS1Q99814 870 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 TMEM109Q9BVC6 243 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 FOXP3Q9BZS1 431 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 PLAC1Q9HBJ0 212 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 PIH1D1Q9NWS0 290 aaKnown RBP13.98□□□□□ -0.17
CDC42-202ENST00000344548 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.98□□□□□ -0.17
CDC42-202ENST00000344548 ZMYND8Q9ULU4 1186 aaPredicted RBP13.98□□□□□ -0.17
CDC42-202ENST00000344548 SHROOM3Q8TF72 1996 aa13.98□□□□□ -0.17
CDC42-202ENST00000344548 HMGB1P1B2RPK0 211 aaPredicted RBP13.97□□□□□ -0.17
CDC42-202ENST00000344548 RASGRF2O14827 1237 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ABLIM3O94929 683 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ZDHHC11BP0C7U3 371 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 HMGA1P17096 107 aaKnown RBP13.97□□□□□ -0.17
CDC42-202ENST00000344548 NR1D1P20393 614 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 DSG1Q02413 1049 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 PPP2R5DQ14738 602 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 EFTUD2Q15029 972 aaKnown RBP eCLIP13.97□□□□□ -0.173e-7■■■□□ 16.7
CDC42-202ENST00000344548 TNFAIP8L3Q5GJ75 292 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 VPS52Q8N1B4 723 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 TMEM199Q8N511 208 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ZNF461Q8TAF7 563 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ZSCAN18Q8TBC5 510 aaPredicted RBP13.97□□□□□ -0.17
CDC42-202ENST00000344548 DPF3Q92784 378 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 BADQ92934 168 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 SERPINB11Q96P15 392 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 YME1L1Q96TA2 773 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 GORASP1Q9BQQ3 440 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 TRIM62Q9BVG3 475 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 TLR6Q9Y2C9 796 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 KIAA1671Q9BY89 1806 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 A0A0A0MRY4 1105 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 CHADO15335 359 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 RTN3O95197 1032 aaPredicted RBP13.97□□□□□ -0.17
CDC42-202ENST00000344548 SPATA31D3P0C874 917 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ELK3P41970 407 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 GLUD2P49448 558 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 NUMBP49757 651 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 MLLT6P55198 1093 aaPredicted RBP13.97□□□□□ -0.17
CDC42-202ENST00000344548 TBX4P57082 545 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ZBTB17Q13105 803 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 PDK1Q15118 436 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 C10orf120Q5SQS8 335 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 AGBL2Q5U5Z8 902 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 SPATA31D4Q6ZUB0 917 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ARHGAP12Q8IWW6 846 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 PGM2Q96G03 612 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 SPATA13Q96N96 652 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 CLIC5Q9NZA1 410 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 TBK1Q9UHD2 729 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 CHMP2BQ9UQN3 213 aa13.97□□□□□ -0.17
CDC42-202ENST00000344548 ALPK3Q96L96 1907 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 ZBBXA8MT70 800 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 HACD1B0YJ81 288 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 E9PAM4 449 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 TLR5O60602 858 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 CSPG5O95196 566 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 GJB5O95377 273 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 PTPN3P26045 913 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 ACTN2P35609 894 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 KCNQ1P51787 676 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 ARL4CP56559 192 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms