RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 TMEM120BA0PK00 339 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 PSMB9P28065 219 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 SMU1Q2TAY7 513 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 POTEAQ6S8J7 498 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 MPZL3Q6UWV2 235 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 PEG10Q86TG7 708 aaKnown RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 PIGKQ92643 395 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 OSBPL3Q9H4L5 887 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 CNOT3O75175 753 aaKnown RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 ACRP10323 421 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 HNMTP50135 292 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 PREPLQ4J6C6 727 aaPredicted RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 PPP1R26Q5T8A7 1209 aaPredicted RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 ILKAPQ9H0C8 392 aaPredicted RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 ARL2BPQ9Y2Y0 163 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 CDY2AQ9Y6F7 541 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 CDY1Q9Y6F8 540 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 FAM25EA8MYX2 175 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 PLK1P53350 603 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 MAPK11Q15759 364 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 ZNF484Q5JVG2 852 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 CASP12Q6UXS9 341 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 DPY30Q9C005 99 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 KLC4Q9NSK0 619 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 MED14O60244 1454 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 CDK12Q9NYV4 1490 aaPredicted RBP12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 CLASP1Q7Z460 1538 aa12.51□□□□□ -0.41
TRIOBP-202ENST00000344404 ZNF862O60290 1169 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 SERPINH1P50454 418 aaKnown RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 UTS2BQ765I0 119 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 ZNF354BQ96LW1 612 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 TNKS2Q9H2K2 1166 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 BRD9Q9H8M2 597 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 POLE3Q9NRF9 147 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PCDHB5Q9Y5E4 795 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 CLTCL1P53675 1640 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 TP73O15350 636 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 HOXA7P31268 230 aaPredicted RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 SLC47A2Q86VL8 602 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 CHPFQ8IZ52 775 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 GPC2Q8N158 579 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 CLEC4MQ9H2X3 399 aaPredicted RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 VANGL2Q9ULK5 521 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 ITIH2P19823 946 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PTPN3P26045 913 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 SPIDRQ14159 915 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PGBD2Q6P3X8 592 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 EXOC2Q96KP1 924 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 LRRC4BQ9NT99 713 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 DYTNA2CJ06 578 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 KIAA0391O15091 583 aaKnown RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PRMT3O60678 531 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 NFKB1P19838 968 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PFKPQ01813 784 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 DDR2Q16832 855 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 RAET1GQ6H3X3 334 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 ACAD10Q6JQN1 1059 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 DENND1CQ8IV53 801 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 COLGALT1Q8NBJ5 622 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 FAM120BQ96EK7 910 aaKnown RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PDCD10Q9BUL8 212 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 ABCC3O15438 1527 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 SEC22BO75396 215 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 AKT2P31751 481 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 USP50Q70EL3 339 aaPredicted RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 MCOLN3Q8TDD5 553 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 MAT2BQ9NZL9 334 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 FAM86B2P0C5J1 330 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 PABPC1P11940 636 aaKnown RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 EPORP19235 508 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 NRG3P56975 720 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 MYL6P60660 151 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 MAB21L3Q8N8X9 362 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 TDRD5Q8NAT2 981 aaKnown RBP12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 SPATA20Q8TB22 786 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 OMA1Q96E52 524 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 CHKBQ9Y259 395 aa12.5□□□□□ -0.41
TRIOBP-202ENST00000344404 ATG7O95352 703 aa12.49□□□□□ -0.41
TRIOBP-202ENST00000344404 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
TRIOBP-202ENST00000344404 ADSLP30566 484 aaPredicted RBP12.49□□□□□ -0.41
TRIOBP-202ENST00000344404 LHX1P48742 406 aa12.49□□□□□ -0.41
TRIOBP-202ENST00000344404 PKN2Q16513 984 aaKnown RBP12.49□□□□□ -0.41
TRIOBP-202ENST00000344404 SYDE1Q6ZW31 735 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms